低成本、简便的 PCR 流程,可用于低资源国家的 Htlv-1/2 分子诊断。

IF 2.1 3区 医学 Q2 PARASITOLOGY Acta tropica Pub Date : 2024-09-14 DOI:10.1016/j.actatropica.2024.107395
Nicolás Ducasa , Diego Domínguez , Paula Benencio , Laura Alfie , Patricia Etcheves , Giampaolo Scarton , Mirna Biglione , Mariela Caputo
{"title":"低成本、简便的 PCR 流程,可用于低资源国家的 Htlv-1/2 分子诊断。","authors":"Nicolás Ducasa ,&nbsp;Diego Domínguez ,&nbsp;Paula Benencio ,&nbsp;Laura Alfie ,&nbsp;Patricia Etcheves ,&nbsp;Giampaolo Scarton ,&nbsp;Mirna Biglione ,&nbsp;Mariela Caputo","doi":"10.1016/j.actatropica.2024.107395","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><div>HTLV-1/2 exhibit a widespread distribution globally and are associated with severe clinical manifestations, necessitating precise viral identification for diagnosis. Currently, there are no official diagnostic guidelines, and a variety of published protocols exists. We introduce an enhanced nested real-time PCR technique followed by high-resolution melting (rtPCR-HRM), designed to offer a cost-effective and straightforward tool for the simultaneous identification of both viruses.</div></div><div><h3>Methods</h3><div>The technique was tested in a retrospective, blinded study, involving a total panel of 110 samples, of which 47 were positive for HTLV-1, 12 for HTLV-2, and 51 tested negatives. Additionally, we compared the performance of this technique with a line immunoassay (LIA).</div></div><div><h3>Results</h3><div>The results demonstrate 100 % sensitivity, specificity, and diagnostic accuracy for both viruses. Sensitivity analysis indicated that at least 1 viral copy of HTLV-1 and 14.4 viral copies of HTLV-2 could be reliably detected.</div></div><div><h3>Conclusions</h3><div>Our results indicate that rtPCR-HRM is effective in confirming HTLV-1 and HTLV-2 infection, important in Latin American countries where both viruses circulate. Furthermore, the proposed strategy provides a new tool that can be used to resolve indeterminate cases identified by Western blot, with the added advantage of being faster and simpler than n-PCR and more cost-effective than other probe-based RT-PCRs.</div></div>","PeriodicalId":7240,"journal":{"name":"Acta tropica","volume":"260 ","pages":"Article 107395"},"PeriodicalIF":2.1000,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Low-cost and simple PCR process for access to molecular diagnosis of HTLV-1/2 in low-resource countries\",\"authors\":\"Nicolás Ducasa ,&nbsp;Diego Domínguez ,&nbsp;Paula Benencio ,&nbsp;Laura Alfie ,&nbsp;Patricia Etcheves ,&nbsp;Giampaolo Scarton ,&nbsp;Mirna Biglione ,&nbsp;Mariela Caputo\",\"doi\":\"10.1016/j.actatropica.2024.107395\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background</h3><div>HTLV-1/2 exhibit a widespread distribution globally and are associated with severe clinical manifestations, necessitating precise viral identification for diagnosis. Currently, there are no official diagnostic guidelines, and a variety of published protocols exists. We introduce an enhanced nested real-time PCR technique followed by high-resolution melting (rtPCR-HRM), designed to offer a cost-effective and straightforward tool for the simultaneous identification of both viruses.</div></div><div><h3>Methods</h3><div>The technique was tested in a retrospective, blinded study, involving a total panel of 110 samples, of which 47 were positive for HTLV-1, 12 for HTLV-2, and 51 tested negatives. Additionally, we compared the performance of this technique with a line immunoassay (LIA).</div></div><div><h3>Results</h3><div>The results demonstrate 100 % sensitivity, specificity, and diagnostic accuracy for both viruses. Sensitivity analysis indicated that at least 1 viral copy of HTLV-1 and 14.4 viral copies of HTLV-2 could be reliably detected.</div></div><div><h3>Conclusions</h3><div>Our results indicate that rtPCR-HRM is effective in confirming HTLV-1 and HTLV-2 infection, important in Latin American countries where both viruses circulate. Furthermore, the proposed strategy provides a new tool that can be used to resolve indeterminate cases identified by Western blot, with the added advantage of being faster and simpler than n-PCR and more cost-effective than other probe-based RT-PCRs.</div></div>\",\"PeriodicalId\":7240,\"journal\":{\"name\":\"Acta tropica\",\"volume\":\"260 \",\"pages\":\"Article 107395\"},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2024-09-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta tropica\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0001706X24002778\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"PARASITOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta tropica","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0001706X24002778","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PARASITOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

背景:HTLV-1/2 在全球广泛分布,并伴有严重的临床表现,因此需要进行精确的病毒鉴定以进行诊断。目前,尚无官方诊断指南,已公布的方案也多种多样。我们介绍了一种增强型巢式实时 PCR 技术和高分辨率熔解技术(rtPCR-HRM),旨在为同时鉴定这两种病毒提供一种经济高效的直接工具:在一项回顾性盲法研究中对该技术进行了测试,共检测了 110 份样本,其中 47 份样本检测结果为 HTLV-1 阳性,12 份样本检测结果为 HTLV-2 阳性,51 份样本检测结果为阴性。此外,我们还比较了该技术与线性免疫测定(LIA)的性能:结果:结果表明,对这两种病毒的敏感性、特异性和诊断准确性均为 100%。灵敏度分析表明,至少可以可靠地检测出 1 个 HTLV-1 病毒拷贝和 14.4 个 HTLV-2 病毒拷贝:我们的研究结果表明,rtPCR-HRM 能有效确诊 HTLV-1 和 HTLV-2 感染,这在两种病毒均有流行的拉丁美洲国家非常重要。此外,所提出的策略还提供了一种新工具,可用于解决 Western 印迹鉴定出的不确定病例,其额外优势是比 n-PCR 更快、更简单,比其他基于探针的 RT-PCR 更具成本效益。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Low-cost and simple PCR process for access to molecular diagnosis of HTLV-1/2 in low-resource countries

Background

HTLV-1/2 exhibit a widespread distribution globally and are associated with severe clinical manifestations, necessitating precise viral identification for diagnosis. Currently, there are no official diagnostic guidelines, and a variety of published protocols exists. We introduce an enhanced nested real-time PCR technique followed by high-resolution melting (rtPCR-HRM), designed to offer a cost-effective and straightforward tool for the simultaneous identification of both viruses.

Methods

The technique was tested in a retrospective, blinded study, involving a total panel of 110 samples, of which 47 were positive for HTLV-1, 12 for HTLV-2, and 51 tested negatives. Additionally, we compared the performance of this technique with a line immunoassay (LIA).

Results

The results demonstrate 100 % sensitivity, specificity, and diagnostic accuracy for both viruses. Sensitivity analysis indicated that at least 1 viral copy of HTLV-1 and 14.4 viral copies of HTLV-2 could be reliably detected.

Conclusions

Our results indicate that rtPCR-HRM is effective in confirming HTLV-1 and HTLV-2 infection, important in Latin American countries where both viruses circulate. Furthermore, the proposed strategy provides a new tool that can be used to resolve indeterminate cases identified by Western blot, with the added advantage of being faster and simpler than n-PCR and more cost-effective than other probe-based RT-PCRs.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Acta tropica
Acta tropica 医学-寄生虫学
CiteScore
5.40
自引率
11.10%
发文量
383
审稿时长
37 days
期刊介绍: Acta Tropica, is an international journal on infectious diseases that covers public health sciences and biomedical research with particular emphasis on topics relevant to human and animal health in the tropics and the subtropics.
期刊最新文献
Natural infection with Trypanosoma cruzi and feeding habits of Triatominae (Hemiptera: Reduviidae) from the state of Durango, Mexico. Seasonal dynamics of Amblyomma ticks in South America: a meta-analytical approach. Molecular evidence of Bartonella spp. in biting midges of the genus Culicoides Latreille (Diptera: Ceratopogonidae) from Brazil. Viral Metagenomics of Hematophagous Insects Collected in the Carajas Mining Complex, Pará State, Brazil. Accuracy of diagnostic tests for feline sporotrichosis: A systematic review and meta-analysis
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1