从中国青藏高原盐湖中分离出的西藏维吉巴菌(Virgibacillus tibetensis sp.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-09-01 DOI:10.1099/ijsem.0.006525
Dongyang Li, Dorji Phurbu, Xuan Zhang, Zi-Xuan Liu, Rui Wang, Yan-Yan Zheng, Yu-Guang Zhou, Ya-Jing Yu, Lu Xue, Ai-Hua Li
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引用次数: 0

摘要

从西藏隆木错湖中分离出一株细菌,命名为 C22-A2T。菌株 C22-A2T 的细胞呈长杆形,革兰氏染色阴性,不形成芽孢,具有阳性过氧化氢酶和氧化酶活性。最佳生长温度为 20-25℃,pH 值为 8.0,NaCl 为 3.0-7.0%(w/v)。16S rRNA 基因和全基因组序列的系统进化分析表明,菌株 C22-A2T 属于维吉杆菌属,其 16S rRNA 基因与维吉杆菌 halodenitrificans DSM 10037T 的相似度最高(97.6%)。菌株C22-A2T与病毒属相关种的模式菌株的平均核苷酸同一性值小于74.4%,数字DNA-DNA杂交值小于20.2%,均分别低于95%和70%的物种划分阈值。基因组分析表明,菌株 C22-A2T 含有负责渗透和氧化压力的基因,使其能够适应周围环境。在生化和生理特征方面,菌株 C22-A2T 与维吉巴菌属具有相似的特征,包括主要的细胞脂肪酸 anteiso-C15 :0、主要呼吸醌 MK-7,以及极性脂质磷脂酰甘油和二磷脂酰甘油。根据系统发生学、系统基因组学、形态学、生理学和生物化学特征的综合分析,拟将菌株C22-A2T作为维吉巴菌属的一个新种,命名为西藏维吉巴菌(Virgibacillus tibetensis sp.)
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Virgibacillus tibetensis sp. nov., isolated from salt lake on the Tibetan plateau of China.

One bacterial strain, designated as C22-A2T, was isolated from Lake LungmuCo in Tibet. Cells of strain C22-A2T were long rod-shaped, Gram-stain-negative, non-spore-forming, with positive catalase and oxidase activity. Optimal growth occurred at 20-25 °C, pH 8.0 and with 3.0-7.0% (w/v) NaCl. Phylogenetic analysis of 16S rRNA gene and whole genome sequences revealed that strain C22-A2T belonged to the genus Virgibacillus, showing the highest 16S rRNA gene similarity to Virgibacillus halodenitrificans DSM 10037T (97.6%). The average nucleotide identity values between strain C22-A2T and the type strains of related species in the genus Virgibacillus were less than 74.4% and the digital DNA-DNA hybridization values were less than 20.2%, both below the species delineation thresholds of 95 and 70% respectively. The genome analysis revealed that strain C22-A2T harboured genes responsible for osmotic and oxidative stress, enabling it to adapt to its surrounding environment. In terms of biochemical and physiological characteristics, strain C22-A2T shared similar characteristics with the genus Virgibacillus, including the predominant cellular fatty acid anteiso-C15 : 0, the major respiratory quinone MK-7, as well as the polar lipids phosphatidylglycerol and diphosphatidylglycerol. Based on the comprehensive analysis of phylogenetic, phylogenomic, morphological, physiological and biochemical characteristics, strain C22-A2T is proposed to represent a novel species of the genus Virgibacillus, named as Virgibacillus tibetensis sp. nov. (=CGMCC 1.19202T=KCTC 43426T).

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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