NEREA 扩增观测站：海洋沿岸生态学的综合方法。

IF 5.8 2区综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Scientific Data Pub Date : 2024-09-10 DOI:10.1038/s41597-024-03787-y

Lucia Campese, Luca Russo, Maria Abagnale, Adriana Alberti, Giancarlo Bachi, Cecilia Balestra, Daniele Bellardini, Angela Buondonno, Ulisse Cardini, Ylenia Carotenuto, Giovanni Checcucci, Maria Luisa Chiusano, Isabella D'Ambra, Giuliana d'Ippolito, Iole Di Capua, Vincenzo Donnarumma, Angelo Fontana, Marta Furia, Denisse Galarza-Verkovitch, Roberto Gallia, Karine Labadie, Serena Leone, Priscilla Licandro, Antonio Longo, Maira Maselli, Louise Merquiol, Carola Murano, Pedro H Oliveira, Augusto Passarelli, Isabella Percopo, Aude Perdereau, Roberta Piredda, Francesca Raffini, Vittoria Roncalli, Hans-Joachim Ruscheweyh, Ennio Russo, Maria Saggiomo, Chiara Santinelli, Diana Sarno, Shinichi Sunagawa, Ferdinando Tramontano, Anna Chiara Trano, Marco Uttieri, Patrick Wincker, Gianpaolo Zampicinini, Raffaella Casotti, Fabio Conversano, Domenico D'Alelio, Daniele Iudicone, Francesca Margiotta, Marina Montresor

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引用次数: 0

摘要

那不勒斯扩增观测站生态研究计划（NEREA）旨在那不勒斯湾（GoN）建立一个扩增观测站，通过综合方法促进对海洋生态系统的了解。受塔拉海洋探险队的启发，在马雷恰拉长期生态研究（LTER-MC）基地科学遗产的基础上，NEREA 将传统的物理、化学和生物测量方法与最先进的方法（如代谢条码和元基因组学）相结合。在此，我们介绍了从 2019 年 4 月到 2020 年 1 月收集的前 10 个月的 NEREA 数据，包括物理化学参数、浮游生物多样性（如显微镜和流式细胞仪）、原核生物和真核生物代谢条码、原核生物基因目录以及 3818 个原核生物元基因组组装基因组（MAGs）。NEREA 的工作产生了大量多方面的数据，增强了我们对海洋生态系统的了解，促进了科学假设和想法的发展。

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The NEREA Augmented Observatory: an integrative approach to marine coastal ecology.

The NEREA (Naples Ecological REsearch for Augmented observatories) initiative aims to establish an augmented observatory in the Gulf of Naples (GoN), designed to advance the understanding of marine ecosystems through a holistic approach. Inspired by the Tara Oceans expedition and building on the scientific legacy of the MareChiara Long-Term Ecological Research (LTER-MC) site, NEREA integrates traditional physical, chemical, and biological measurements with state-of-the-art methodologies such as metabarcoding and metagenomics. Here we present the first 10 months of NEREA data, collected from April 2019 to January 2020, encompassing physico-chemical parameters, plankton biodiversity (e.g., microscopy and flow cytometry), prokaryotic and eukaryotic metabarcoding, a prokaryotic gene catalogue, and a collection of 3818 prokaryotic Metagenome-Assembled Genomes (MAGs). NEREA's efforts produce a significant volume of multifaceted data, which enhances our understanding of marine ecosystems and promotes the development of scientific hypotheses and ideas.

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来源期刊

Scientific Data Social Sciences-Education

CiteScore

11.20

自引率

4.10%

发文量

689

审稿时长

16 weeks

期刊介绍： Scientific Data is an open-access journal focused on data, publishing descriptions of research datasets and articles on data sharing across natural sciences, medicine, engineering, and social sciences. Its goal is to enhance the sharing and reuse of scientific data, encourage broader data sharing, and acknowledge those who share their data. The journal primarily publishes Data Descriptors, which offer detailed descriptions of research datasets, including data collection methods and technical analyses validating data quality. These descriptors aim to facilitate data reuse rather than testing hypotheses or presenting new interpretations, methods, or in-depth analyses.