1.利用基于尺寸的微过滤富集霍奇金和里德-斯特恩伯格(HRS)细胞

IF 1.4 4区 医学 Q4 GENETICS & HEREDITY Cancer Genetics Pub Date : 2024-08-01 DOI:10.1016/j.cancergen.2024.08.003
Brianna Munnich , Kilannin Krysiak , Becca Brown , Richard Cote , Abdulrahman Saadalla , Anthony Williams , Mark Watson , Todd Fehniger , Siddarth Rawal
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引用次数: 0

摘要

大的多核里德-斯滕伯格细胞和单核霍奇金(HRS)细胞(分别为 50-100 微米和 20-30 微米)是霍奇金淋巴瘤(HL)的病理特征。目前可用来分离这些细胞的方法具有挑战性、耗时且产量低,因此不适合用于临床检测。为了应对这些挑战,我们试图开发一种利用基于尺寸的微过滤富集 HRS 细胞的方法。这些微滤器最初是为富集血液中的稀有细胞而设计的,有 40,000 个 8 µm 的孔,可以去除小的淋巴细胞,同时捕获感兴趣的较大的 HRS 细胞。我们使用 L428s(一种 HL 细胞系)混合物,将其添加到离体淋巴结(LN)中,证明了平均捕获 93% 输入 L428s 的能力。在我们的模型中,CD30 是一种在 HRS 细胞上表达的细胞表面标记物,通过芯片上的免疫荧光染色从背景中识别出 L428s。同时,我们优化了直接从微滤器中提取 DNA 的方法,并可靠地获得了超过 3 µg 的 DNA。这些 DNA 随后被用于单核苷酸多态性基因分型,进一步验证了我们从 LN 中富集 L428s 的能力。最后,这些实验在原代人类 HL 样本中进行了复制,富集前 HRS 细胞占 3.75%,过滤后 HRS 细胞占 58.25%。这种富集水平和DNA产量足以完成下游临床检测,包括高通量测序、液体活检和荧光原位杂交。在临床上,这种工作流程可以让我们提出有关霍奇金病的起始以及导致转移和复发的驱动因素的新问题。
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1. Enrichment of Hodgkin and Reed-Sternberg (HRS) cells using size-based microfiltration
Large, multinucleated Reed-Sternberg and mononuclear Hodgkin (HRS) cells (50-100 µm and 20-30 µm, respectively) are pathognomonic features in Hodgkin Lymphoma (HL). Current methods available to isolate these cells are challenging, time-consuming, and low yield, making them unsuitable for clinical assays. To address these challenges, we sought to develop a method for HRS cell enrichment using size-based microfiltration. Originally created to enrich rare cells in the blood, these microfilters have 40,000, 8 µm pores which will remove small lymphocytes while capturing larger HRS cells of interest.
Using mixtures of L428s, an HL cell line, spiked into dissociated lymph node (LN), we demonstrated the ability to capture on average 93% of the input L428s. In our model, CD30, a cell surface marker expressed on HRS cells, was employed to identify the L428s from the background via immunofluorescent staining on-chip. Concurrently, we optimized a method for DNA extraction directly from the microfilter and reliably yielded over 3 µg of DNA. This DNA was then used for single nucleotide polymorphism genotyping which further verified our ability to enrich L428s from the LN. Finally, these experiments were replicated with a primary human HL sample with 3.75% HRS cells pre-enrichment and 58.25% HRS cells post-filtration. This level of enrichment and DNA yield will be sufficient to accomplish downstream clinical assays including high-throughput sequencing, liquid biopsy, and fluorescence in situ hybridization. Clinically, this workflow may allow us to ask new questions about the initiation of Hodgkins and the driving factors leading to metastasis and relapse.
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来源期刊
Cancer Genetics
Cancer Genetics ONCOLOGY-GENETICS & HEREDITY
CiteScore
3.20
自引率
5.30%
发文量
167
审稿时长
27 days
期刊介绍: The aim of Cancer Genetics is to publish high quality scientific papers on the cellular, genetic and molecular aspects of cancer, including cancer predisposition and clinical diagnostic applications. Specific areas of interest include descriptions of new chromosomal, molecular or epigenetic alterations in benign and malignant diseases; novel laboratory approaches for identification and characterization of chromosomal rearrangements or genomic alterations in cancer cells; correlation of genetic changes with pathology and clinical presentation; and the molecular genetics of cancer predisposition. To reach a basic science and clinical multidisciplinary audience, we welcome original full-length articles, reviews, meeting summaries, brief reports, and letters to the editor.
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