Ivan Ezhov, Kevin Scibilia, Luca Giannoni, Florian Kofler, Ivan Iliash, Felix Hsieh, Suprosanna Shit, Charly Caredda, Frédéric Lange, Bruno Montcel, Ilias Tachtsidis, Daniel Rueckert
{"title":"从脑组织的漫反射光谱中学习实时推断分子组成。","authors":"Ivan Ezhov, Kevin Scibilia, Luca Giannoni, Florian Kofler, Ivan Iliash, Felix Hsieh, Suprosanna Shit, Charly Caredda, Frédéric Lange, Bruno Montcel, Ilias Tachtsidis, Daniel Rueckert","doi":"10.1117/1.JBO.29.9.093509","DOIUrl":null,"url":null,"abstract":"<p><strong>Significance: </strong>Diffuse optical modalities such as broadband near-infrared spectroscopy (bNIRS) and hyperspectral imaging (HSI) represent a promising alternative for low-cost, non-invasive, and fast monitoring of living tissue. Particularly, the possibility of extracting the molecular composition of the tissue from the optical spectra deems the spectroscopy techniques as a unique diagnostic tool.</p><p><strong>Aim: </strong>No established method exists to streamline the inference of the biochemical composition from the optical spectrum for real-time applications such as surgical monitoring. We analyze a machine learning technique for inference of changes in the molecular composition of brain tissue.</p><p><strong>Approach: </strong>We propose modifications to the existing learnable methodology based on the Beer-Lambert law. We evaluate the method's applicability to linear and nonlinear formulations of this physical law. The approach is tested on data obtained from the bNIRS- and HSI-based monitoring of brain tissue.</p><p><strong>Results: </strong>The results demonstrate that the proposed method enables real-time molecular composition inference while maintaining the accuracy of traditional methods. Preliminary findings show that Beer-Lambert law-based spectral unmixing allows contrasting brain anatomy semantics such as the vessel tree and tumor area.</p><p><strong>Conclusion: </strong>We present a data-driven technique for inferring molecular composition change from diffuse spectroscopy of brain tissue, potentially enabling intra-operative monitoring.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 9","pages":"093509"},"PeriodicalIF":3.0000,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11421663/pdf/","citationCount":"0","resultStr":"{\"title\":\"Learnable real-time inference of molecular composition from diffuse spectroscopy of brain tissue.\",\"authors\":\"Ivan Ezhov, Kevin Scibilia, Luca Giannoni, Florian Kofler, Ivan Iliash, Felix Hsieh, Suprosanna Shit, Charly Caredda, Frédéric Lange, Bruno Montcel, Ilias Tachtsidis, Daniel Rueckert\",\"doi\":\"10.1117/1.JBO.29.9.093509\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Significance: </strong>Diffuse optical modalities such as broadband near-infrared spectroscopy (bNIRS) and hyperspectral imaging (HSI) represent a promising alternative for low-cost, non-invasive, and fast monitoring of living tissue. Particularly, the possibility of extracting the molecular composition of the tissue from the optical spectra deems the spectroscopy techniques as a unique diagnostic tool.</p><p><strong>Aim: </strong>No established method exists to streamline the inference of the biochemical composition from the optical spectrum for real-time applications such as surgical monitoring. We analyze a machine learning technique for inference of changes in the molecular composition of brain tissue.</p><p><strong>Approach: </strong>We propose modifications to the existing learnable methodology based on the Beer-Lambert law. We evaluate the method's applicability to linear and nonlinear formulations of this physical law. The approach is tested on data obtained from the bNIRS- and HSI-based monitoring of brain tissue.</p><p><strong>Results: </strong>The results demonstrate that the proposed method enables real-time molecular composition inference while maintaining the accuracy of traditional methods. Preliminary findings show that Beer-Lambert law-based spectral unmixing allows contrasting brain anatomy semantics such as the vessel tree and tumor area.</p><p><strong>Conclusion: </strong>We present a data-driven technique for inferring molecular composition change from diffuse spectroscopy of brain tissue, potentially enabling intra-operative monitoring.</p>\",\"PeriodicalId\":15264,\"journal\":{\"name\":\"Journal of Biomedical Optics\",\"volume\":\"29 9\",\"pages\":\"093509\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2024-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11421663/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biomedical Optics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1117/1.JBO.29.9.093509\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/9/24 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biomedical Optics","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1117/1.JBO.29.9.093509","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/9/24 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Learnable real-time inference of molecular composition from diffuse spectroscopy of brain tissue.
Significance: Diffuse optical modalities such as broadband near-infrared spectroscopy (bNIRS) and hyperspectral imaging (HSI) represent a promising alternative for low-cost, non-invasive, and fast monitoring of living tissue. Particularly, the possibility of extracting the molecular composition of the tissue from the optical spectra deems the spectroscopy techniques as a unique diagnostic tool.
Aim: No established method exists to streamline the inference of the biochemical composition from the optical spectrum for real-time applications such as surgical monitoring. We analyze a machine learning technique for inference of changes in the molecular composition of brain tissue.
Approach: We propose modifications to the existing learnable methodology based on the Beer-Lambert law. We evaluate the method's applicability to linear and nonlinear formulations of this physical law. The approach is tested on data obtained from the bNIRS- and HSI-based monitoring of brain tissue.
Results: The results demonstrate that the proposed method enables real-time molecular composition inference while maintaining the accuracy of traditional methods. Preliminary findings show that Beer-Lambert law-based spectral unmixing allows contrasting brain anatomy semantics such as the vessel tree and tumor area.
Conclusion: We present a data-driven technique for inferring molecular composition change from diffuse spectroscopy of brain tissue, potentially enabling intra-operative monitoring.
期刊介绍:
The Journal of Biomedical Optics publishes peer-reviewed papers on the use of modern optical technology for improved health care and biomedical research.