整合生物信息学和实验验证,鉴定可作为子宫内膜癌预后生物标志物和治疗靶点的线粒体通透性转换驱动坏死相关 lncRNA。

IF 2.6 3区 医学 Q2 OBSTETRICS & GYNECOLOGY Reproductive Sciences Pub Date : 2024-10-01 DOI:10.1007/s43032-024-01693-7
Ting Zhou, Haojia Li, Qi Zhang, Shuangshuang Cheng, Qian Zhang, Yuwei Yao, Kejun Dong, Zheng Xu, Wan Shu, Jun Zhang, Hongbo Wang
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引用次数: 0

摘要

子宫内膜癌(EC)是女性常见的恶性肿瘤,死亡率和复发率都很高。线粒体通透性转换(MPT)驱动的坏死是一种新的细胞程序性死亡形式。与线粒体通透性转化(MPT)驱动的坏死相关的lncRNAs(MRLs)参与EC的发展仍不清楚。我们旨在通过构建基于MRLs的新型预后模型来预测EC患者的预后,并探索潜在的分子功能。我们利用基于MRLs的多Cox回归和最小绝对缩减和选择操作器(LASSO)回归算法建立了一个风险预后模型。通过接收者操作特征曲线(ROC)分析以及提名图和一致性指数(C-index)评估,对该模型的预测效果进行了评估。根据中位风险评分将患者分为高风险组和低风险组。值得注意的是,高风险组的总生存率(OS)明显较低。基因本体(GO)和基因组富集分析(GSEA)表明,刺猬和细胞周期通路在高风险组中富集。肿瘤免疫功能障碍和排斥(TIDE)显示,高危组中的患者极有可能出现免疫逃避,免疫治疗的效果也较差。两组患者的免疫功能也存在明显差异。根据九项指标,药物敏感性分析确定了几种对预后有潜在疗效的抗癌药物。同时,研究结果表明,OGFRP1 通过影响 EC 线粒体膜的通透性起到致癌作用。因此,由九个MRL构建的风险模型可用于有效预测EC患者的临床预后和治疗反应。
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Integrating Bioinformatics and Experimental Validation to Identify Mitochondrial Permeability Transition-Driven Necrosis-Related lncRNAs that can Serve as Prognostic Biomarkers and Therapeutic Targets in Endometrial Carcinoma.

Endometrial carcinoma (EC) is a common malignant tumor in women with high mortality and relapse rates. Mitochondrial permeability transition (MPT)-driven necrosis is a novel form of programmed cell death. The MPT-driven necrosis related lncRNAs (MRLs) involved in EC development remain unclear. We aimed to predict the outcomes of patients with EC by constructing a novel prognostic model based on MRLs and explore potential molecular functions. A risk prognostic model was developed utilizing multi-Cox regression in conjunction with the Least Absolute Shrinkage and Selection Operator (LASSO) regression algorithm, which was based on MRLs. The predictive efficacy of the model was evaluated through receiver operating characteristic (ROC) curve analysis, as well as nomogram and concordance index (C-index) assessments. Patients were categorized into high- and low-risk groups based on their median risk scores. Notably, the high-risk group exhibited significantly poorer overall survival (OS) outcomes. Gene ontology (GO) and Gene set enrichment analysis (GSEA) demonstrated that Hedgehog and cell cycle pathways were enriched in the high-risk group. Tumor Immune Dysfunction and Exclusion (TIDE) displayed that patients in the high-risk group showed a high likelihood of immune evasion and less effective immunotherapy. A significant disparity in immune function was also observed between two groups. Based on the nine-MRLs, drug sensitivity analysis identified several anticancer drugs with potential efficacy in prognosis. Meanwhile, the results demonstrated that OGFRP1 plays a carcinogenic role by affecting mitochondrial membrane permeability in EC. Therefore, the risk model constructed by nine MRLs could be used to predict the clinical outcomes and therapeutic responses in patients with EC effectively.

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来源期刊
Reproductive Sciences
Reproductive Sciences 医学-妇产科学
CiteScore
5.50
自引率
3.40%
发文量
322
审稿时长
4-8 weeks
期刊介绍: Reproductive Sciences (RS) is a peer-reviewed, monthly journal publishing original research and reviews in obstetrics and gynecology. RS is multi-disciplinary and includes research in basic reproductive biology and medicine, maternal-fetal medicine, obstetrics, gynecology, reproductive endocrinology, urogynecology, fertility/infertility, embryology, gynecologic/reproductive oncology, developmental biology, stem cell research, molecular/cellular biology and other related fields.
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