全面评估结直肠癌中阳性 T 细胞功能调节剂的免疫属性和免疫疗法反应。

IF 2.5 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY BMC Gastroenterology Pub Date : 2024-10-01 DOI:10.1186/s12876-024-03409-2
Ke Pu, Jingyuan Gao, Yang Feng, Jian Hu, Shunli Tang, Guodong Yang, Chuan Xu
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引用次数: 0

摘要

背景:T细胞功能阳性调节因子(PTFRs)是T细胞增殖和活化不可或缺的组成部分,已被确定为结直肠癌(CRC)的潜在预后标志物。尽管如此,它们在肿瘤微环境(TME)中的作用及其对免疫疗法的反应仍未得到充分了解:本研究通过分析四个独立的转录组数据集,深入研究了与 PTFR 相关的 CRC 亚型,强调了对预后最有意义的 PTFR。我们确定了两种亚型之间的差异表达基因(DEGs),并利用 LASSO 和 Cox 回归方法建立了 PTFR 风险模型。随后,我们探讨了该模型与生存时间、临床特征、TME特征、肿瘤突变特征、微卫星不稳定性(MSI)、癌症干细胞(CSC)指数以及对化疗、靶向治疗和免疫治疗的反应之间的关联:结果:PTFR 风险模型对 CRC 具有很强的预测能力。结果:PTFR 风险模型对 CRC 具有很强的预测能力,它有助于估计免疫细胞的组成、HLA 表达水平、免疫检查点表达、突变负荷、CSC 指数特征以及免疫疗法的效果:这项研究加深了我们对 PTFRs 在 CRC 进展中的作用的理解,并为 CRC 免疫疗法引入了一个创新的评估框架。该框架提高了对治疗结果的预测,有助于定制治疗策略。
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Comprehensive evaluation of immunological attributes and immunotherapy responses of positive T cell function regulators in colorectal cancer.

Background: Positive regulators of T-cell function (PTFRs), integral to T-cell proliferation and activation, have been identified as potential prognostic markers in colorectal cancer (CRC). Despite this, their role within the tumor microenvironment (TME) and their response to immunotherapy are not yet fully understood.

Methods: This study delved into PTFR-related CRC subtypes by analyzing four independent transcriptome datasets, emphasizing the most significant prognostic PTFRs. We identified differentially expressed genes (DEGs) between two subtypes and developed a PTFR risk model using LASSO and Cox regression methods. The model's associations with survival time, clinical features, TME characteristics, tumor mutation profiles, microsatellite instability (MSI), cancer stem cell (CSC) index, and responses to chemotherapy, targeted therapy, and immunotherapy were subsequently explored.

Results: The PTFR risk model demonstrated a strong predictive capacity for CRC. It facilitated the estimation of immune cell composition, HLA expression levels, immune checkpoint expression, mutation burden, CSC index features, and the effectiveness of immunotherapy.

Conclusions: This study enhances our understanding of the role of PTFRs in CRC progression and introduces an innovative assessment framework for CRC immunotherapy. This framework improves the prediction of treatment outcomes and aids in the customization of therapeutic strategies.

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来源期刊
BMC Gastroenterology
BMC Gastroenterology 医学-胃肠肝病学
CiteScore
4.20
自引率
0.00%
发文量
465
审稿时长
6 months
期刊介绍: BMC Gastroenterology is an open access, peer-reviewed journal that considers articles on all aspects of the prevention, diagnosis and management of gastrointestinal and hepatobiliary disorders, as well as related molecular genetics, pathophysiology, and epidemiology.
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