细胞衰老的泛癌症特征揭示了其与肿瘤微环境和预后相关的肿瘤间异质性。

IF 7 2区 医学 Q1 BIOLOGY Computers in biology and medicine Pub Date : 2024-11-01 Epub Date: 2024-10-02 DOI:10.1016/j.compbiomed.2024.109196
Kang Li, Chen Guo, Rufeng Li, Yufei Yao, Min Qiang, Yuanyuan Chen, Kangsheng Tu, Yungang Xu
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引用次数: 0

摘要

细胞衰老(CS)以不可逆的细胞周期停滞为特征,在衰老和癌症等疾病中起着关键作用。近年来,人们对细胞衰老与癌症之间错综复杂的关系进行了蓬勃的探索,细胞衰老被认为是一种抑制或促进因素,并被正式确认为 14 种癌症标志之一。然而,在阐明这种关系在不同癌症类型中的差异及其在肿瘤发生发展的多方面参与时,仍然缺乏全面的特征描述。在这里,我们系统地评估了来自 33 种癌症类型的 10,000 多个肿瘤样本的细胞衰老情况,首先定义了一组与癌症相关的 CS 标志,并得出了代表 CS 状态的定量指标,即 CS 评分。然后,我们研究了 CS 的异质性及其与不同癌症的预后、免疫浸润和治疗反应之间错综复杂的关系。结果表明,细胞衰老显示出两个不同的预后组:保护组(包括 LIHC 等 11 种癌症)和风险组(包括 STAD 等 4 种癌症)。随后对这两组癌症进行的深入研究揭示了细胞衰老产生不同影响的潜在分子和细胞机制,包括特定通路的不同激活和免疫细胞浸润的差异。两组患者的 CS 状态与免疫和化疗反应之间的差异也进一步证实了这些结果。总之,我们的研究加深了人们对与肿瘤微环境和癌症预后相关的肿瘤间细胞衰老异质性的理解。
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Pan-cancer characterization of cellular senescence reveals its inter-tumor heterogeneity associated with the tumor microenvironment and prognosis.

Cellular senescence (CS) is characterized by the irreversible cell cycle arrest and plays a key role in aging and diseases, such as cancer. Recent years have witnessed the burgeoning exploration of the intricate relationship between CS and cancer, with CS recognized as either a suppressing or promoting factor and officially acknowledged as one of the 14 cancer hallmarks. However, a comprehensive characterization remains absent from elucidating the divergences of this relationship across different cancer types and its involvement in the multi-facets of tumor development. Here we systematically assessed the cellular senescence of over 10,000 tumor samples from 33 cancer types, starting by defining a set of cancer-associated CS signatures and deriving a quantitative metric representing the CS status, called CS score. We then investigated the CS heterogeneity and its intricate relationship with the prognosis, immune infiltration, and therapeutic responses across different cancers. As a result, cellular senescence demonstrated two distinct prognostic groups: the protective group with eleven cancers, such as LIHC, and the risky group with four cancers, including STAD. Subsequent in-depth investigations between these two groups unveiled the potential molecular and cellular mechanisms underlying the distinct effects of cellular senescence, involving the divergent activation of specific pathways and variances in immune cell infiltrations. These results were further supported by the disparate associations of CS status with the responses to immuno- and chemo-therapies observed between the two groups. Overall, our study offers a deeper understanding of inter-tumor heterogeneity of cellular senescence associated with the tumor microenvironment and cancer prognosis.

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来源期刊
Computers in biology and medicine
Computers in biology and medicine 工程技术-工程:生物医学
CiteScore
11.70
自引率
10.40%
发文量
1086
审稿时长
74 days
期刊介绍: Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.
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