常规实体瘤新一代测序过程中克隆造血变异的检测与解读:单个机构的经验。

IF 3.4 3区 医学 Q1 PATHOLOGY Journal of Molecular Diagnostics Pub Date : 2024-10-02 DOI:10.1016/j.jmoldx.2024.09.004
Adil Menon, Madina Sukhanova, Kevin L Nocito, Juehua Gao, Lawrence J Jennings, Erica R Vormittag-Nocito
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引用次数: 0

摘要

克隆性造血(CH)和意义未定的克隆性全血(CCUS)是最近公认的诊断实体,是心血管疾病和髓系恶性肿瘤的独立危险因素。CH是一种偶然发现,为了更好地了解这一人群中突变的发生率,我们对实体瘤下一代测序(NGS)样本中CH/CCUS相关突变的发生率进行了评估。研究人员对 2022 年 2 月至 2023 年 4 月期间通过 NGS 数据确诊的实体瘤恶性肿瘤的临床测序数据进行了回顾性分析。对病例中与 CH/CCUS 相关的基因变异进行了审查。对测序数据的变异等位基因频率和其他因素进行了评估,以确定CH/CCUS的风险。研究期间共评估了 2,479 例病例。其中,29 个病例显示出潜在的 CH/CCUS 相关变异,共发现 33 个变异。这些变异在多种肿瘤类型中均有发现,其中胶质瘤最为常见。在超过一半的病例中发现了重要的心脏病史,而血细胞计数异常的病例则很少。本文介绍了将变异标记为可疑CH的详细标准,并建议将这些标准作为今后的报告指南。这些变异属于偶然发现,需要利用单个机构队列进行更广泛的随访或改变治疗方法。
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Detection and Interpretation of Clonal Hematopoiesis Variants during Routine Solid Tumor Next-Generation Sequencing: A Single-Institution Experience.

Clonal hematopoiesis (CH) and clonal cytopenia of undetermined significance (CCUS) are recently recognized diagnostic entities that serve as an independent risk factors for cardiovascular disease and myeloid malignancy. CH is an incidental finding, and evaluation of the incidence of CH/CCUS-associated mutations in solid tumor next-generation sequencing samples was undertaken to better understand the prevalence of mutations in this population. A retrospective review of clinical sequencing data for solid tumor malignancies diagnosed between February 2022 and April 2023 on next-generation sequencing data was performed. Cases were reviewed for variants in genes associated with CH/CCUS. Variant allele frequencies and other factors of the sequencing data were assessed for determining risk of CH/CCUS. A total of 2479 cases were evaluated during the study period. Of these, 29 cases demonstrated potential CH/CCUS-associated mutations, with a total of 33 variants identified. These were identified in a variety of tumor types, with gliomas being the most common. Significant cardiac histories were found in over half of cases identified, and few cases had abnormal blood counts. Detailed criteria for flagging variants as suspicious for CH and recommendations for these criteria as future guidelines for reporting are described. These variants are incidental findings that require more extensive follow-up or change in therapy management using a single institutional cohort.

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来源期刊
CiteScore
8.10
自引率
2.40%
发文量
143
审稿时长
43 days
期刊介绍: The Journal of Molecular Diagnostics, the official publication of the Association for Molecular Pathology (AMP), co-owned by the American Society for Investigative Pathology (ASIP), seeks to publish high quality original papers on scientific advances in the translation and validation of molecular discoveries in medicine into the clinical diagnostic setting, and the description and application of technological advances in the field of molecular diagnostic medicine. The editors welcome for review articles that contain: novel discoveries or clinicopathologic correlations including studies in oncology, infectious diseases, inherited diseases, predisposition to disease, clinical informatics, or the description of polymorphisms linked to disease states or normal variations; the application of diagnostic methodologies in clinical trials; or the development of new or improved molecular methods which may be applied to diagnosis or monitoring of disease or disease predisposition.
期刊最新文献
Editorial Board Table of Contents 25 Years of Publishing The Journal of Molecular Diagnostics Navigating the Flood The Era of Molecular Hematopathology
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