基于 SERS 的微滴平台,用于高通量筛选大肠杆菌菌株,以高效生物合成 D-苯基乳酸。

IF 4.3 3区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Frontiers in Bioengineering and Biotechnology Pub Date : 2024-09-20 eCollection Date: 2024-01-01 DOI:10.3389/fbioe.2024.1470830
Lin Hu, Ruoshi Luo, Dan Wang, Fanzhen Lin, Kaixing Xiao, Yaqi Kang
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引用次数: 0

摘要

D-苯基乳酸(D-PLA)是一种有效的抗菌剂,通常通过化学方法合成。然而,由于这些反应复杂且污染大,因此需要一种更简单、更环保的方法。在这项研究中,构建了一种用于 D-PLA 生物合成的菌株,但其效率受到 D-乳酸脱氢酶(DLDH)活性的限制。为了解决这个问题,我们构建了一个 DLDH 突变体库,并利用表面增强拉曼光谱(SERS)技术在单细胞水平上对 D-PLA 进行精确定量。TB24突变体的D-PLA生产率显著提高,酶活性增加了23.03倍,这归因于底物结合口袋中氢键的增强和疏水性的增加。通过实施多层次优化策略,包括甘油脱氢酶(GlyDH)与 DLDH 的共表达、底盘细胞置换和 RBS 工程,D-PLA 产量显著提高,达到 128.4 克/升。这项研究强调了基于 SERS 的微滴高通量筛选(HTS)在鉴定优良突变酶方面的有效性,并为大规模 D-PLA 生物转化提供了一种策略。
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SERS-based microdroplet platform for high-throughput screening of Escherichia coli strains for the efficient biosynthesis of D-phenyllactic acid.

D-Phenyllactic acid (D-PLA) is a potent antimicrobial typically synthesized through chemical methods. However, due to the complexity and large pollution of these reactions, a simpler and more eco-friendly approach was needed. In this study, a strain for D-PLA biosynthesis was constructed, but the efficiency was restricted by the activity of D-lactate dehydrogenase (DLDH). To address this issue, a DLDH mutant library was constructed and the Surface-Enhanced Raman Spectroscopy (SERS) was employed for the precise quantification of D-PLA at the single-cell level. The TB24 mutant exhibited a significant improvement in D-PLA productivity and a 23.03-fold increase in enzymatic activity, which was attributed to the enhanced hydrogen bonding and increased hydrophobicity within the substrate-binding pocket. By implementing multi-level optimization strategies, including the co-expression of glycerol dehydrogenase (GlyDH) with DLDH, chassis cell replacement, and RBS engineering, a significant increase in D-PLA yields was achieved, reaching 128.4 g/L. This study underscores the effectiveness of SERS-based microdroplet high-throughput screening (HTS) in identifying superior mutant enzymes and offers a strategy for large-scale D-PLA biotransformation.

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来源期刊
Frontiers in Bioengineering and Biotechnology
Frontiers in Bioengineering and Biotechnology Chemical Engineering-Bioengineering
CiteScore
8.30
自引率
5.30%
发文量
2270
审稿时长
12 weeks
期刊介绍: The translation of new discoveries in medicine to clinical routine has never been easy. During the second half of the last century, thanks to the progress in chemistry, biochemistry and pharmacology, we have seen the development and the application of a large number of drugs and devices aimed at the treatment of symptoms, blocking unwanted pathways and, in the case of infectious diseases, fighting the micro-organisms responsible. However, we are facing, today, a dramatic change in the therapeutic approach to pathologies and diseases. Indeed, the challenge of the present and the next decade is to fully restore the physiological status of the diseased organism and to completely regenerate tissue and organs when they are so seriously affected that treatments cannot be limited to the repression of symptoms or to the repair of damage. This is being made possible thanks to the major developments made in basic cell and molecular biology, including stem cell science, growth factor delivery, gene isolation and transfection, the advances in bioengineering and nanotechnology, including development of new biomaterials, biofabrication technologies and use of bioreactors, and the big improvements in diagnostic tools and imaging of cells, tissues and organs. In today`s world, an enhancement of communication between multidisciplinary experts, together with the promotion of joint projects and close collaborations among scientists, engineers, industry people, regulatory agencies and physicians are absolute requirements for the success of any attempt to develop and clinically apply a new biological therapy or an innovative device involving the collective use of biomaterials, cells and/or bioactive molecules. “Frontiers in Bioengineering and Biotechnology” aspires to be a forum for all people involved in the process by bridging the gap too often existing between a discovery in the basic sciences and its clinical application.
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