利用高斯过程回归建立水中多体相互作用模型

IF 2.8 2区 化学 Q3 CHEMISTRY, PHYSICAL The Journal of Physical Chemistry A Pub Date : 2024-10-24 Epub Date: 2024-10-11 DOI:10.1021/acs.jpca.4c05873
Yulian T Manchev, Paul L A Popelier
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引用次数: 0

摘要

我们报告了通过高斯过程回归(GPR)捕捉多体相互作用的第一原理水二聚体势垒。通过使用通过 KeOps 库实现的自定义核函数,建模工作在之前工作的基础上进行了升级,从而可以构建更大的 GPR 模型,并与下一代机器学习力场 FFLUX 相连接。一个名为 WD24 的新合成水二聚体数据集被用于模型训练。在测试集和模拟中,生成的模型可以预测 90% 的二聚体几何形状,其化学准确度在 90% 以内。模型捕捉到了势能面的曲率,从水分子相距近 4.3 Å 的起始结构出发,成功完成了几何优化,总能量误差仅为 2.6 kJ mol-1。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Modeling Many-Body Interactions in Water with Gaussian Process Regression.

We report a first-principles water dimer potential that captures many-body interactions through Gaussian process regression (GPR). Modeling is upgraded from previous work by using a custom kernel function implemented through the KeOps library, allowing for much larger GPR models to be constructed and interfaced with the next-generation machine learning force field FFLUX. A new synthetic water dimer data set, called WD24, is used for model training. The resulting models can predict 90% of dimer geometries within chemical accuracy for a test set and in a simulation. The curvature of the potential energy surface is captured by the models, and a successful geometry optimization is completed with a total energy error of just 2.6 kJ mol-1, from a starting structure where water molecules are separated by nearly 4.3 Å. Dimeric modeling of a flexible, noncrystalline system with FFLUX is shown for the first time.

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来源期刊
The Journal of Physical Chemistry A
The Journal of Physical Chemistry A 化学-物理:原子、分子和化学物理
CiteScore
5.20
自引率
10.30%
发文量
922
审稿时长
1.3 months
期刊介绍: The Journal of Physical Chemistry A is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, and chemical physicists.
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