基于生物素-链霉亲和素技术的人工过氧化物酶可媲美天然过氧化物酶的效率

IF 11.3 1区 化学 Q1 CHEMISTRY, PHYSICAL ACS Catalysis Pub Date : 2024-10-19 DOI:10.1021/acscatal.4c03208
Manjistha Mukherjee, Valerie Waser, Elinor F. Morris, Nico V. Igareta, Alec H. Follmer, Roman P. Jakob, Dilbirin Üzümcü, Timm Maier, Thomas R. Ward
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引用次数: 0

摘要

血红素过氧化物酶是一类重要的含血红素金属酶,利用过氧化物氧化各种底物。利用成熟的催化机理,人们对各种过氧化物酶模拟物进行了广泛的研究和优化。在此,我们报告了一种基于生物素-链霉亲和素技术的人工血红素过氧化物酶的设计、组装、表征和基因工程。野生型人工过氧化物酶和性能最佳的双突变体人工过氧化物酶的晶体结构为我们提供了有关为优化过氧化物酶活性而战略性突变的附近残基(即 Sav S112E K121H)的宝贵信息。我们假设这两个残基模仿了第二配位层中的极性残基,它们参与激活了两种被广泛研究的过氧化物酶中结合的过氧化物:氯过氧化物酶(CPO)(即 Glu 183 和 His 105)和辣根过氧化物酶(即 Arg 38 和 His 42)。尽管缺乏可产生 "推动效应 "的紧密结合的轴配体,但进化后的人工过氧化物酶在过氧化氢存在下氧化两种标准底物(TMB 和 ABTS)时表现出了同类最佳的活性。
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Artificial Peroxidase Based on the Biotin–Streptavidin Technology that Rivals the Efficiency of Natural Peroxidases
Heme peroxidases represent an important category of heme-containing metalloenzymes that harness peroxide to oxidize a diverse array of substrates. Capitalizing on a well-established catalytic mechanism, diverse peroxidase mimics have been widely investigated and optimized. Herein, we report on the design, assembly, characterization, and genetic engineering of an artificial heme-based peroxidase relying on the biotin–streptavidin technology. The crystal structures of the wild-type and the best-performing double mutant of artificial peroxidases provide valuable insight regarding the nearby residues strategically mutated to optimize the peroxidase activity (i.e., Sav S112E K121H). We hypothesize that these two residues mimic the polar residues in the second coordination sphere, involved in activating the bound peroxide in two very widely studied peroxidases: chloroperoxidase (CPO) (i.e., Glu 183 and His 105) and horseradish peroxidase (i.e., Arg 38 and His 42). Despite the absence of a tightly bound axial ligand, which can exert a “push effect”, the evolved artificial peroxidase exhibits best-in-class activity for oxidizing two standard substrates (TMB and ABTS) in the presence of hydrogen peroxide.
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来源期刊
ACS Catalysis
ACS Catalysis CHEMISTRY, PHYSICAL-
CiteScore
20.80
自引率
6.20%
发文量
1253
审稿时长
1.5 months
期刊介绍: ACS Catalysis is an esteemed journal that publishes original research in the fields of heterogeneous catalysis, molecular catalysis, and biocatalysis. It offers broad coverage across diverse areas such as life sciences, organometallics and synthesis, photochemistry and electrochemistry, drug discovery and synthesis, materials science, environmental protection, polymer discovery and synthesis, and energy and fuels. The scope of the journal is to showcase innovative work in various aspects of catalysis. This includes new reactions and novel synthetic approaches utilizing known catalysts, the discovery or modification of new catalysts, elucidation of catalytic mechanisms through cutting-edge investigations, practical enhancements of existing processes, as well as conceptual advances in the field. Contributions to ACS Catalysis can encompass both experimental and theoretical research focused on catalytic molecules, macromolecules, and materials that exhibit catalytic turnover.
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