聚乙二醇诱导氧化应激下蓖麻(Ricinus communis L.)的生理、生化和转录组变化

IF 5.4 3区 材料科学 Q2 CHEMISTRY, PHYSICAL ACS Applied Energy Materials Pub Date : 2024-10-17 DOI:10.1186/s12870-024-05691-4
Yong Zhao, Pei Lei, Huibo Zhao, Rui Luo, Guorui Li, Jianjun Di, Li Wen, Zhibiao He, Deyun Tan, Fanjuan Meng, Fenglan Huang
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引用次数: 0

摘要

背景:蓖麻是一种重要的工业原料。干旱引起的氧化应激会导致蓖麻生长缓慢和产量下降。然而,干旱诱导蓖麻氧化胁迫的机制仍不清楚。因此,本研究对 PEG-6000 胁迫 3 d 和 7 d 后再水合 4 d 的蓖麻植株根部进行了生理、生化和 RNA-seq 分析:在 PEG-6000 胁迫 3 天和 7 天后,蓖麻叶片的光合速率受到抑制。对胁迫 3 天和 7 天并补水 4 天的蓖麻根进行的生化分析表明,胁迫 3 天后 APX 和 CAT 的活性最高,而 POD、GR 和 SOD 的活性在胁迫 7 天后达到峰值。RNA-seq 分析显示,在 PEG-6000 胁迫 3 天、7 天和补水 4 天后,蓖麻根部分别有 2926、1507 和 111 个差异表达基因(DEGs)。对 DEGs 的 GO 分析表明,抗氧化活性显著富集。此外,对 DEGs 的 KEGG 富集分析表明,谷胱甘肽代谢、脂肪酸代谢和植物激素信号转导等代谢途径明显富集。WGCNA 确定了 navajowhite1 模块中的核心基因 PP2C39 和 GA2ox4,它们在 PEG-6000 胁迫下上调。在这些结果的基础上,我们提出了蓖麻对干旱诱导的氧化胁迫的响应模型:本研究提供了宝贵的抗氧化基因资源,加深了我们对抗氧化调控的理解,为进一步开展蓖麻植物的分子育种工作铺平了道路。
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Physiological, biochemical, and transcriptomic alterations in Castor (Ricinus communis L.) under polyethylene glycol-induced oxidative stress.

Background: Castor is an important industrial raw material. Drought-induced oxidative stress leads to slow growth and decreased yields in castor. However, the mechanisms of drought-induced oxidative stress in castor remain unclear. Therefore, in this study, physiological, biochemical, and RNA-seq analyses were conducted on the roots of castor plants under PEG-6000 stress for 3 d and 7 d followed by 4 d of hydration.

Results: The photosynthetic rate of castor leaves was inhibited under PEG-6000 stress for 3 and 7 d. Biochemical analysis of castor roots stressed for 3 d and 7 d, and rehydrated for 4 d revealed that the activities of APX and CAT were highest after only 3 d of stress, whereas the activities of POD, GR, and SOD peaked after 7 d of stress. RNA-seq analysis revealed 2926, 1507, and 111 differentially expressed genes (DEGs) in the roots of castor plants under PEG-6000 stress for 3 d and 7 d and after 4 d of rehydration, respectively. GO analysis of the DEGs indicated significant enrichment in antioxidant activity. Furthermore, KEGG enrichment analysis of the DEGs revealed significantly enriched metabolic pathways, including glutathione metabolism, fatty acid metabolism, and plant hormone signal transduction. WGCNA identified the core genes PP2C39 and GA2ox4 in the navajowhite1 module, which was upregulated under PEG-6000 stress. On the basis of these results, we propose a model for the response to drought-induced oxidative stress in castor.

Conclusions: This study provides valuable antioxidant gene resources, deepening our understanding of antioxidant regulation and paving the way for further molecular breeding of castor plants.

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来源期刊
ACS Applied Energy Materials
ACS Applied Energy Materials Materials Science-Materials Chemistry
CiteScore
10.30
自引率
6.20%
发文量
1368
期刊介绍: ACS Applied Energy Materials is an interdisciplinary journal publishing original research covering all aspects of materials, engineering, chemistry, physics and biology relevant to energy conversion and storage. The journal is devoted to reports of new and original experimental and theoretical research of an applied nature that integrate knowledge in the areas of materials, engineering, physics, bioscience, and chemistry into important energy applications.
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