基于基因组的 Natrialbaceae 科分类以及对来自三个盐湖和一个盐碱地的四种新型嗜卤古细菌的描述。

IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Extremophiles Pub Date : 2024-10-22 DOI:10.1007/s00792-024-01366-y
Xin-Yue Dong, Ya-Ling Mao, Qing-Ke Zhang, Ling-Rui Zhu, Jing Hou, Heng-Lin Cui
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引用次数: 0

摘要

对 Halobacteria 类中 Natrialbaceae 科的现有代表物种进行了系统发生学、系统发生组学和比较基因组学分析。结果发现,目前的 Halobiforma 和 Halomontanus 的物种分别与 Natronobacterium 和 Natronoglomus 的物种有亲缘关系。根据Natrialbaceae科内区分属的平均氨基酸相同度(AAI)临界值(≤ 76%),Halobiforma和Natronoglomus应分别与Natronobacterium和Halomontanus合并。除此以外,还同时对从中国三个盐湖和一个盐碱地分离出的四株新型嗜卤古细菌 CCL63T、AD-5T、CG52T 和 KLK7T 进行了多相分类。表型、系统发育、系统基因组和比较基因组分析表明,菌株 CCL63T(= CGMCC 1.18663T = JCM 35096T)代表 Natrialbaceae 科的一个新属,菌株 AD-5T (= CGMCC 1.13783T = JCM 33734T)和 CG52T(= CGMCC 1.17139T = JCM 34160T)代表 Natronococcus 属的两个新种,菌株 KLK7T(= MCCC 4K00128T = KCTC 4307T)代表 Haloterrigena 的一个新种。根据这些模式菌株,进一步提出了 Halovalidus salilacus gen.nov.、sp.nov.、Natronococcus wangiae sp.nov.、Natronococcus zhouii sp.nov.和 Haloterrigena salinisoli sp.nov.。
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Genome‑based classification of the family Natrialbaceae and description of four novel halophilic archaea from three saline lakes and a saline-alkaline land.

The current representatives of the family Natrialbaceae within the class Halobacteria were subjected to phylogenetic, phylogenomic, and comparative genomic analyses. The current species of Halobiforma and Halomontanus were found to be related to those of Natronobacterium and Natronoglomus, respectively. According to the cutoff value of average amino acid identity (AAI) (≤ 76%) proposed to differentiate genera within the family Natrialbaceae, Halobiforma, and Natronoglomus should be merged with Natronobacterium and Halomontanus, respectively. Beyond these, four novel halophilic archaeal strains, CCL63T, AD-5T, CG52T, and KLK7T, isolated from three saline lakes and a saline-alkaline land in China, were simultaneously subjected to polyphasic classification. The phenotypic, phylogenetic, phylogenomic, and comparative genomic analyses indicated that strain CCL63T (= CGMCC 1.18663T = JCM 35096T) represents a novel genus of the family Natrialbaceae, strains AD-5T (= CGMCC 1.13783T = JCM 33734T) and CG52T (= CGMCC 1.17139T = JCM 34160T) represent two novel species of the genus Natronococcus, and strain KLK7T (= MCCC 4K00128T = KCTC 4307T) represents a novel species of Haloterrigena. Halovalidus salilacus gen. nov., sp. nov., Natronococcus wangiae sp. nov., Natronococcus zhouii sp. nov., and Haloterrigena salinisoli sp. nov. are further proposed based on these type strains accordingly.

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来源期刊
Extremophiles
Extremophiles 生物-生化与分子生物学
CiteScore
6.80
自引率
6.90%
发文量
28
审稿时长
2 months
期刊介绍: Extremophiles features original research articles, reviews, and method papers on the biology, molecular biology, structure, function, and applications of microbial life at high or low temperature, pressure, acidity, alkalinity, salinity, or desiccation; or in the presence of organic solvents, heavy metals, normally toxic substances, or radiation.
期刊最新文献
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