识别与扩张型心肌病相关的遗传和表观遗传融合基因的统计模型。

IF 2.8 3区 生物学 Q2 GENETICS & HEREDITY Frontiers in Genetics Pub Date : 2024-10-01 eCollection Date: 2024-01-01 DOI:10.3389/fgene.2024.1438887
Ling Fei, Jun Zhang, Degen Zhuo
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引用次数: 0

摘要

扩张型心肌病(DCM)是一种心脏疾病,会导致左心室扩大和减弱,影响心脏有效泵血的能力。大多数遗传病因仍有待了解。此前,我们曾利用已知的种系遗传融合基因(HFGs)来确定与多发性骨髓瘤和白血病相关的 HFGs。在这项研究中,我们建立了一个统计模型,研究从 122 名 DCM 患者和 252 名 GTEx(基因型组织表达)健康对照者的左心室中发现的融合转录本,发现了与 DCM 相关的新型 HFGs(从 4% 到 87.7%)和 EFGs(从 4% 到 99.2%)。与 DCM 相关的大量新型 HFGs 和 EFGs 的发现提供了第一手证据,证明 DCM 是种系遗传和环境异常之间相互作用的发育结果,并为未来的研究、诊断和治疗应用铺平了道路,为未来的 DCM 治疗带来了希望。
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A statistical model to identify hereditary and epigenetic fusion genes associated with dilated cardiomyopathy.

Dilated cardiomyopathy (DCM) is a heart condition that causes enlarged and weakened left ventricles and affects the heart's ability to pump blood effectively. Most genetic etiology still needs to be understood. Previously, we have used the known germline hereditary fusion genes (HFGs) to identify HFGs associated with multiple myeloma and leukemia. In this study, we have developed a statistical model to study fusion transcripts discovered from the left ventricles of 122 DCM patients and 252 GTEx (Genotype Tissue Expression) healthy controls to discover novel HFGs, ranging from 4% to 87.7%, and EFGs, ranging from 4% to 99.2%, associated with DCM. This discovery of numerous novel HFGs and EFGs associated with DCM provides first-hand evidence that DCM results from interactive developmental consequences between germline genetic and environmental abnormalities and paves the way for future research and diagnostic and therapeutic applications, instilling hope for the future of DCM treatment.

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来源期刊
Frontiers in Genetics
Frontiers in Genetics Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
5.50
自引率
8.10%
发文量
3491
审稿时长
14 weeks
期刊介绍: Frontiers in Genetics publishes rigorously peer-reviewed research on genes and genomes relating to all the domains of life, from humans to plants to livestock and other model organisms. Led by an outstanding Editorial Board of the world’s leading experts, this multidisciplinary, open-access journal is at the forefront of communicating cutting-edge research to researchers, academics, clinicians, policy makers and the public. The study of inheritance and the impact of the genome on various biological processes is well documented. However, the majority of discoveries are still to come. A new era is seeing major developments in the function and variability of the genome, the use of genetic and genomic tools and the analysis of the genetic basis of various biological phenomena.
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