利用可解释的机器学习预测重症监护室住院患者的血流感染和抗菌药物耐药性:基于电子病历数据的早期预警预测,指导抗菌药物管理。

PLOS digital health Pub Date : 2024-10-16 eCollection Date: 2024-10-01 DOI:10.1371/journal.pdig.0000641
Davide Ferrari, Pietro Arina, Jonathan Edgeworth, Vasa Curcin, Veronica Guidetti, Federica Mandreoli, Yanzhong Wang
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引用次数: 0

摘要

非医院感染和抗菌药物耐药性(AMR)是全球范围内医疗保健领域面临的严峻挑战。为了解决这些问题,在实验室检测的指导下,各种感染控制协议和个性化治疗策略旨在检测血流感染(BSI)并评估 AMR 的可能性。在本研究中,我们介绍了一种基于多目标符号回归(MOSR)的机器学习(ML)方法,这是一种以多目标方式创建可读数学方程形式的 ML 模型的进化方法,克服了标准单目标方法的局限性。这种方法利用了重症监护病房入院时收集的现成临床数据,目的是预测是否存在 BSI 和 AMR。我们使用自然失衡的真实世界数据和通过超采样技术实现平衡的数据,将其与成熟的 ML 算法进行比较,从而进一步评估其性能。我们的研究结果表明,传统的 ML 模型在所有训练场景中都表现不佳。与此相反,MOSR 通过对 F1 分数进行优化,将假阴性降到最低,其性能优于其他 ML 算法,无论训练集平衡与否,都能持续提供可靠的结果,其 F1 分数分别比其他任何算法高出 22 分和 28 分。这项研究为加强抗菌药物管理(AMS)战略开辟了一条充满希望的道路。值得注意的是,MOSR 方法可以很容易地大规模实施,它提供了一种新的 ML 工具,可以为这些受有限数据可用性影响的关键医疗保健问题找到解决方案。
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Using interpretable machine learning to predict bloodstream infection and antimicrobial resistance in patients admitted to ICU: Early alert predictors based on EHR data to guide antimicrobial stewardship.

Nosocomial infections and Antimicrobial Resistance (AMR) stand as formidable healthcare challenges on a global scale. To address these issues, various infection control protocols and personalized treatment strategies, guided by laboratory tests, aim to detect bloodstream infections (BSI) and assess the potential for AMR. In this study, we introduce a machine learning (ML) approach based on Multi-Objective Symbolic Regression (MOSR), an evolutionary approach to create ML models in the form of readable mathematical equations in a multi-objective way to overcome the limitation of standard single-objective approaches. This method leverages readily available clinical data collected upon admission to intensive care units, with the goal of predicting the presence of BSI and AMR. We further assess its performance by comparing it to established ML algorithms using both naturally imbalanced real-world data and data that has been balanced through oversampling techniques. Our findings reveal that traditional ML models exhibit subpar performance across all training scenarios. In contrast, MOSR, specifically configured to minimize false negatives by optimizing also for the F1-Score, outperforms other ML algorithms and consistently delivers reliable results, irrespective of the training set balance with F1-Score.22 and.28 higher than any other alternative. This research signifies a promising path forward in enhancing Antimicrobial Stewardship (AMS) strategies. Notably, the MOSR approach can be readily implemented on a large scale, offering a new ML tool to find solutions to these critical healthcare issues affected by limited data availability.

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