{"title":"软骨素硫酸酯蛋白聚糖 4 伪基因 12 基因变异对结直肠癌风险的影响:一项病例对照研究。","authors":"Xianlei Zhou, Liwen Guo, Zhenbang Yang, Hongxue Xu, Zhi Zhang, Xuemei Zhang","doi":"10.1089/dna.2024.0174","DOIUrl":null,"url":null,"abstract":"<p><p>This study aims to investigate the correlation between the chondroitin sulfate proteoglycan 4 pseudogene 12 (<i>CSPG4P12</i>) polymorphism and the risk of colorectal cancer (CRC). This case-control study involved 850 patients with CRC and 850 health controls. The genotypes of <i>CSPG4P12</i> (rs2880765, rs6496932, and rs8040855) were determined by the TaqMan-MGB probe method. Logistic regression model was employed to evaluate the association of <i>CSPG4P12</i> single-nucleotide polymorphisms (SNPs) with the risk of CRC by calculating the odds ratio (OR) and 95% confidence interval (CI). The <i>CSPG4P12</i> exhibited lower expression in CRC tissues. Our data showed that the rs6496932 variant increased CRC risk (CA vs. CC: <i>p</i> = 0.006; CA + AA vs. CC: <i>p</i> = 0.005). In contrast, the rs8040855 variant reduced the risk of CRC (CG vs. CC: <i>p</i> < 0.001; CG + GG vs. CC: <i>p</i> < 0.001). Stratification by gender and age revealed that the rs8040855 variant decreased CRC risk; however, the rs6496932 variant increased CRC risk among males (CA vs. CC: <i>p</i> = 0.024; CA + AA vs. CC: <i>p</i> = 0.014) and younger individuals (CA vs. CC: <i>p</i> = 0.004; CA + AA vs. CC: <i>p</i> = 0.010). When stratified by smoking and drinking status, the rs8040855 variant decreased CRC risk among nonsmokers (CG vs. CC: <i>p</i> < 0.001; CG + GG vs. CC: <i>p</i> < 0.001) and nondrinkers (CA vs. CC: <i>p</i> = 0.002; CA + AA vs. CC: <i>p</i> = 0.004). The rs6496932 variant increased CRC risk among nonsmokers (CA vs. CC: <i>p</i> = 0.016; CA + AA vs. CC: <i>p</i> = 0.036) and nondrinkers (CG vs. CC: <i>p</i> < 0.001; CG + GG vs. CC: <i>p</i> < 0.001). Haplotype analysis showed that the <i>CSPG4P12</i> T<sub>rs2880765</sub>C<sub>rs6496932</sub>G<sub>rs8040855</sub> haplotype reduced the risk of CRC compared with the reference haplotype (<i>CSPG4P12</i> A<sub>rs2880765</sub>C<sub>rs6496932</sub>C<sub>rs8040855</sub>) (OR = 0.46, 95% CI = 0.26-0.82, <i>p</i> = 0.049). These findings highlight the potential of these genetic variants as biomarkers for CRC susceptibility, offering insights into personalized prevention strategies.</p>","PeriodicalId":93981,"journal":{"name":"DNA and cell biology","volume":" ","pages":"596-604"},"PeriodicalIF":0.0000,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Impact of Chondroitin Sulfate Proteoglycan 4 Pseudogene 12 Genetic Variants on Colorectal Cancer Risk: A Case-Control Study.\",\"authors\":\"Xianlei Zhou, Liwen Guo, Zhenbang Yang, Hongxue Xu, Zhi Zhang, Xuemei Zhang\",\"doi\":\"10.1089/dna.2024.0174\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>This study aims to investigate the correlation between the chondroitin sulfate proteoglycan 4 pseudogene 12 (<i>CSPG4P12</i>) polymorphism and the risk of colorectal cancer (CRC). This case-control study involved 850 patients with CRC and 850 health controls. The genotypes of <i>CSPG4P12</i> (rs2880765, rs6496932, and rs8040855) were determined by the TaqMan-MGB probe method. Logistic regression model was employed to evaluate the association of <i>CSPG4P12</i> single-nucleotide polymorphisms (SNPs) with the risk of CRC by calculating the odds ratio (OR) and 95% confidence interval (CI). The <i>CSPG4P12</i> exhibited lower expression in CRC tissues. Our data showed that the rs6496932 variant increased CRC risk (CA vs. CC: <i>p</i> = 0.006; CA + AA vs. CC: <i>p</i> = 0.005). In contrast, the rs8040855 variant reduced the risk of CRC (CG vs. CC: <i>p</i> < 0.001; CG + GG vs. CC: <i>p</i> < 0.001). Stratification by gender and age revealed that the rs8040855 variant decreased CRC risk; however, the rs6496932 variant increased CRC risk among males (CA vs. CC: <i>p</i> = 0.024; CA + AA vs. CC: <i>p</i> = 0.014) and younger individuals (CA vs. CC: <i>p</i> = 0.004; CA + AA vs. CC: <i>p</i> = 0.010). When stratified by smoking and drinking status, the rs8040855 variant decreased CRC risk among nonsmokers (CG vs. CC: <i>p</i> < 0.001; CG + GG vs. CC: <i>p</i> < 0.001) and nondrinkers (CA vs. CC: <i>p</i> = 0.002; CA + AA vs. CC: <i>p</i> = 0.004). The rs6496932 variant increased CRC risk among nonsmokers (CA vs. CC: <i>p</i> = 0.016; CA + AA vs. CC: <i>p</i> = 0.036) and nondrinkers (CG vs. CC: <i>p</i> < 0.001; CG + GG vs. CC: <i>p</i> < 0.001). Haplotype analysis showed that the <i>CSPG4P12</i> T<sub>rs2880765</sub>C<sub>rs6496932</sub>G<sub>rs8040855</sub> haplotype reduced the risk of CRC compared with the reference haplotype (<i>CSPG4P12</i> A<sub>rs2880765</sub>C<sub>rs6496932</sub>C<sub>rs8040855</sub>) (OR = 0.46, 95% CI = 0.26-0.82, <i>p</i> = 0.049). These findings highlight the potential of these genetic variants as biomarkers for CRC susceptibility, offering insights into personalized prevention strategies.</p>\",\"PeriodicalId\":93981,\"journal\":{\"name\":\"DNA and cell biology\",\"volume\":\" \",\"pages\":\"596-604\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"DNA and cell biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1089/dna.2024.0174\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/10/18 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"DNA and cell biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1089/dna.2024.0174","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/10/18 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
本研究旨在探讨硫酸软骨素蛋白多糖 4 假基因 12(CSPG4P12)多态性与结直肠癌(CRC)风险之间的相关性。这项病例对照研究涉及 850 名 CRC 患者和 850 名健康对照者。采用 TaqMan-MGB 探针法测定了 CSPG4P12(rs2880765、rs6496932 和 rs8040855)的基因型。采用逻辑回归模型,通过计算几率比(OR)和 95% 置信区间(CI)来评估 CSPG4P12 单核苷酸多态性(SNPs)与 CRC 风险的相关性。CSPG4P12 在 CRC 组织中的表达较低。我们的数据显示,rs6496932 变异增加了 CRC 风险(CA vs. CC:p = 0.006;CA + AA vs. CC:p = 0.005)。相比之下,rs8040855变异降低了患 CRC 的风险(CG vs. CC:p < 0.001;CG + GG vs. CC:p < 0.001)。按性别和年龄分层显示,rs8040855变异降低了CRC风险;然而,rs6496932变异增加了男性(CA vs. CC:p = 0.024;CA + AA vs. CC:p = 0.014)和年轻人(CA vs. CC:p = 0.004;CA + AA vs. CC:p = 0.010)的CRC风险。当按吸烟和饮酒状况分层时,rs8040855变异降低了不吸烟者(CG vs. CC:p < 0.001;CG + GG vs. CC:p < 0.001)和不饮酒者(CA vs. CC:p = 0.002;CA + AA vs. CC:p = 0.004)的 CRC 风险。rs6496932变异增加了不吸烟者(CA vs. CC:p = 0.016;CA + AA vs. CC:p = 0.036)和不饮酒者(CG vs. CC:p < 0.001;CG + GG vs. CC:p < 0.001)的 CRC 风险。单倍型分析表明,与参考单倍型(CSPG4P12 Ars2880765Crs6496932Crs8040855)相比,CSPG4P12 Trs2880765Crs6496932Grs8040855 单倍型可降低患 CRC 的风险(OR = 0.46,95% CI = 0.26-0.82,p = 0.049)。这些发现凸显了这些基因变异作为 CRC 易感性生物标志物的潜力,为个性化预防策略提供了启示。
Impact of Chondroitin Sulfate Proteoglycan 4 Pseudogene 12 Genetic Variants on Colorectal Cancer Risk: A Case-Control Study.
This study aims to investigate the correlation between the chondroitin sulfate proteoglycan 4 pseudogene 12 (CSPG4P12) polymorphism and the risk of colorectal cancer (CRC). This case-control study involved 850 patients with CRC and 850 health controls. The genotypes of CSPG4P12 (rs2880765, rs6496932, and rs8040855) were determined by the TaqMan-MGB probe method. Logistic regression model was employed to evaluate the association of CSPG4P12 single-nucleotide polymorphisms (SNPs) with the risk of CRC by calculating the odds ratio (OR) and 95% confidence interval (CI). The CSPG4P12 exhibited lower expression in CRC tissues. Our data showed that the rs6496932 variant increased CRC risk (CA vs. CC: p = 0.006; CA + AA vs. CC: p = 0.005). In contrast, the rs8040855 variant reduced the risk of CRC (CG vs. CC: p < 0.001; CG + GG vs. CC: p < 0.001). Stratification by gender and age revealed that the rs8040855 variant decreased CRC risk; however, the rs6496932 variant increased CRC risk among males (CA vs. CC: p = 0.024; CA + AA vs. CC: p = 0.014) and younger individuals (CA vs. CC: p = 0.004; CA + AA vs. CC: p = 0.010). When stratified by smoking and drinking status, the rs8040855 variant decreased CRC risk among nonsmokers (CG vs. CC: p < 0.001; CG + GG vs. CC: p < 0.001) and nondrinkers (CA vs. CC: p = 0.002; CA + AA vs. CC: p = 0.004). The rs6496932 variant increased CRC risk among nonsmokers (CA vs. CC: p = 0.016; CA + AA vs. CC: p = 0.036) and nondrinkers (CG vs. CC: p < 0.001; CG + GG vs. CC: p < 0.001). Haplotype analysis showed that the CSPG4P12 Trs2880765Crs6496932Grs8040855 haplotype reduced the risk of CRC compared with the reference haplotype (CSPG4P12 Ars2880765Crs6496932Crs8040855) (OR = 0.46, 95% CI = 0.26-0.82, p = 0.049). These findings highlight the potential of these genetic variants as biomarkers for CRC susceptibility, offering insights into personalized prevention strategies.