日本支持原发性睫状肌运动障碍诊断的基因变异。

IF 2.9 3区 医学 Q2 GENETICS & HEREDITY Clinical Genetics Pub Date : 2024-10-27 DOI:10.1111/cge.14640
Minako Hijikata, Kozo Morimoto, Masashi Ito, Keiko Wakabayashi, Akiko Miyabayashi, Hiroyuki Yamada, Naoto Keicho
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引用次数: 0

摘要

原发性纤毛运动障碍(PCD;OMIM 244400)是一种影响纤毛运动的罕见遗传性疾病,其特征是气道上皮的粘膜纤毛清除功能受损,从而导致慢性鼻-肺表现。迄今为止,已发现 50 多个 PCD 致病基因,这些基因及其变体在不同人群中存在全球性差异。我们对 150 名疑似 PCD 日本患者的 42 个 PCD 致病基因进行了靶向重测序,在 51 名患者中发现了致病或可能致病的变异基因。其中,24 名患者表现出 DRC1 1-4 号外显子的同源缺失,这是日本 PCD 最常见的病因。根据对来自日本普通人群的 7906 个全基因组序列的生物信息学分析,估计该缺失的等位基因频率为 0.0034(95% CI:0.0025-0.0044)。此外,鼻腔样本的 RNA 测序补充了硅学变异预测,有助于确定致病变异。考虑到潜在的种族差异,积累有关这些变异及其功能影响的全球数据至关重要。
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Genetic Variants Supporting the Diagnosis of Primary Ciliary Dyskinesia in Japan.

Primary ciliary dyskinesia (PCD; OMIM 244400) is a rare genetic disorder affecting motile cilia and is characterized by impaired mucociliary clearance in the airway epithelium that leads to chronic oto-sinopulmonary manifestations. To date, over 50 PCD-causing genes have been identified, with these genes and their variants varying globally across populations. We performed targeted resequencing of 42 PCD-causative genes in 150 Japanese patients suspected of having PCD and identified pathogenic or likely pathogenic variants in 51 patients. Among these, 24 patients exhibited a homozygous deletion of DRC1 exons 1-4, the most common cause of PCD in Japan. The allele frequency of this deletion was estimated at 0.0034 (95% CI: 0.0025-0.0044), based on bioinformatic analysis of 7906 whole-genome sequences from the general Japanese population. Additionally, RNA sequencing of nasal samples supplemented in silico variant predictions, aiding in the identification of causative variants. Considering potential ethnic differences, it is essential to accumulate global data on these variants and their functional impacts.

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来源期刊
Clinical Genetics
Clinical Genetics 医学-遗传学
CiteScore
6.50
自引率
0.00%
发文量
175
审稿时长
3-8 weeks
期刊介绍: Clinical Genetics links research to the clinic, translating advances in our understanding of the molecular basis of genetic disease for the practising clinical geneticist. The journal publishes high quality research papers, short reports, reviews and mini-reviews that connect medical genetics research with clinical practice. Topics of particular interest are: • Linking genetic variations to disease • Genome rearrangements and disease • Epigenetics and disease • The translation of genotype to phenotype • Genetics of complex disease • Management/intervention of genetic diseases • Novel therapies for genetic diseases • Developmental biology, as it relates to clinical genetics • Social science research on the psychological and behavioural aspects of living with or being at risk of genetic disease
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