利用带状细胞遗传学对人类染色体异形进行分类的挑战:从有争议的指南到对通用评分系统的需求。

IF 1 Q4 GENETICS & HEREDITY Human Genome Variation Pub Date : 2024-10-24 DOI:10.1038/s41439-024-00295-8
Sílvia Pires, Paula Jorge, Thomas Liehr, Natália Oliva-Teles
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引用次数: 0

摘要

染色体异形(Chromosomal heteromorphisms,CHs)是一种形态变异,主要存在于基因组的组成性异染色质区域,主要由卫星 DNA 的串联重复序列组成。虽然这些区域并非完全没有基因,但通常不会转录为蛋白质,也不会产生明显的表型影响。尽管如此,它们的临床重要性正日益受到关注,一些研究旨在评估它们对人类疾病和易感性的影响,尤其是因为它们似乎是某些组织中长非编码 RNA 的一部分。本文总结了过去二十年来文献中记载的人类异染色质 CHs 的分类方法。目前已发现多种评分系统,而以往在基因诊断中对 CH 进行评估和报告的方法也不一致。由于目前 CH 分类的异质性,数据分析可能存在偏差,从而影响临床报告和人类基因研究的质量。本综述强调了建立通用评分系统的必要性,这对于科学的可重复性以及准确识别和临床评估人类 CHs 至关重要。
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Challenges in classifying human chromosomal heteromorphisms using banding cytogenetics: From controversial guidelines to the need for a universal scoring system.

Chromosomal heteromorphisms (CHs) are morphological variations predominantly found in constitutive heterochromatic regions of the genome, primarily composed of tandemly repetitive sequences of satellite DNA. Although not completely devoid of genes, these regions are typically not transcribed into proteins and lack obvious phenotypic impact. Nonetheless, their clinical importance is increasingly under scrutiny, with several studies aiming to assess their influence on human diseases and susceptibilities, especially as they are seemingly part of the long noncoding RNAs in certain tissues. This article summarizes the classification methods of human heterochromatic CHs documented in the literature over the last two decades. Multiple scoring systems have been identified, and previous approaches for CH assessment and reporting in genetic diagnosis have shown inconsistencies. Owing to the current heterogeneity in the classification of CHs, data analysis may be biased, impacting the quality of clinical reports and human genetic research. This review highlights the need for a universal scoring system, which is essential for scientific reproducibility and the accurate identification and clinical evaluation of human CHs.

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来源期刊
Human Genome Variation
Human Genome Variation Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
2.30
自引率
0.00%
发文量
39
审稿时长
13 weeks
期刊最新文献
Genotypes and phenotypes of neurofibromatosis type 1 patients in Japan: A Hereditary Tumor Cohort Study. CFAP43 variant in persistent respiratory symptoms after hematopoietic cell transplantation. A case of CDKL5 deficiency disorder with a novel intragenic multi-exonic duplication. A mild case of Cockayne syndrome with a novel start-loss variant of ERCC8. Challenges in classifying human chromosomal heteromorphisms using banding cytogenetics: From controversial guidelines to the need for a universal scoring system.
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