杨梅衰退病的流行改变了植物和土壤相关的微生物组和代谢组。

IF 6.2 2区 环境科学与生态学 Q1 GENETICS & HEREDITY Environmental Microbiome Pub Date : 2024-10-24 DOI:10.1186/s40793-024-00618-w
Haiying Ren, Xuefang Huang, Zhenshuo Wang, Yasmine Abdallah, Solabomi Olaitan Ayoade, Xingjiang Qi, Zheping Yu, Qi Wang, Mohamed Mohany, Salim S Al-Rejaie, Bin Li, Gang Li
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引用次数: 0

摘要

背景:在中国,病因不明的衰退病在长江以南地区的杨梅树中流行。此外,有报道称使用有益微生物能够降低该病的发病率,这强调了该病与微生物的关联。因此,揭示微生物组在生物或非生物胁迫下重塑杨梅树免疫力的功能和相关代谢物变得至关重要:扩增子测序数据显示,衰退病显著改变了四个不同壁龛中的细菌和真菌群落及其代谢产物,尤其是根圈土壤和根部。此外,四个壁龛中的微生物群落与杨梅植物相应壁龛中的代谢物相关,健康树木的真菌和细菌网络比患病树木的更复杂。此外,通过分离、鉴定和表征重要的微生物,如健康植株中显著富集的芽孢杆菌ASV804、假单胞菌ASV815,以及病株中显著富集的臭单胞菌ASV719,证明了微生物组在杨梅抗衰退病发生中的作用:总之,我们的研究揭示了衰退病的发生改变了杨梅根圈土壤和根部等四个生态位中的微生物组及其代谢产物,这为控制杨梅衰退病提供了新的视角。
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The epidemic occurrence of decline disease in bayberry trees altered plant and soil related microbiome and metabolome.

Background: In China, decline disease with unknown etiology appeared as an epidemic among bayberry trees in the southern area of the Yangtze River. Furthermore, the use of beneficial microbes has been reported to be able to reduce the incidence of this disease, emphasizing the association of this disease with microorganisms. Therefore, it has become critical to uncover the microbiome's function and related metabolites in remodeling the immunity of bayberry trees under biotic or abiotic stresses.

Results: The amplicon sequencing data revealed that decline disease significantly altered bacterial and fungal communities, and their metabolites in the four distinct niches, especially in the rhizosphere soils and roots. Furthermore, the microbial communities in the four niches correlated with the metabolites of the corresponding niches of bayberry plants, and the fungal and bacterial networks of healthy trees were shown to be more complex than those of diseased trees. In addition, the role of microbiome in the resistance of bayberry trees to the occurrence of decline disease was justified by the isolation, identification, and characterization of important microorganisms such as significantly enriched Bacillus ASV804, Pseudomonas ASV815 in healthy plants, and significantly enriched Stenotrophomonas ASV719 in diseased plants.

Conclusion: Overall, our study revealed that the occurrence of decline disease altered the microbiome and its metabolites in four ecological niches in particular rhizosphere soils and roots of bayberry, which provides new insight into the control of bayberry decline disease.

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来源期刊
Environmental Microbiome
Environmental Microbiome Immunology and Microbiology-Microbiology
CiteScore
7.40
自引率
2.50%
发文量
55
审稿时长
13 weeks
期刊介绍: Microorganisms, omnipresent across Earth's diverse environments, play a crucial role in adapting to external changes, influencing Earth's systems and cycles, and contributing significantly to agricultural practices. Through applied microbiology, they offer solutions to various everyday needs. Environmental Microbiome recognizes the universal presence and significance of microorganisms, inviting submissions that explore the diverse facets of environmental and applied microbiological research.
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