带变压器骨干的扩散模型对低计数 PET 去噪的消融研究

Y Huang, X Liu, T Miyazaki, S Omachi, G El Fakhri, J Ouyang
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摘要

由分层去噪自编码器构建的扩散模型(DM)在图像生成方面取得了显著进展,在图像复原(IR)任务领域的影响力也与日俱增。与此同时,其自动编码器的骨干也从 UNet 演化为视觉转换器,如 Restormer。因此,将骨干网络的贡献与额外的生成学习方案区分开来非常重要。值得注意的是,DM 在不同的红外任务中表现出不同的性能,而最近基于高级变换器的 DM 在 PET 去噪方面的性能还未得到充分探索。在本研究中,我们进一步提出了一个直观的问题:"{如果我们有足够强大的骨干网,DM 是否可以作为一种通用的附加生成学习方案,进一步提高 PET 去噪效果}"。具体来说,我们研究了同类最佳的红外模型之一,即 DiffIR,它是基于 Restormer 骨干的潜在 DM。在 25% 低剂量 18F-FDG 全身 PET 去噪任务中,我们对 UNet、SR3(UNet+像素 DM)和 Restormer 进行了定性和定量比较,旨在找出最佳实践。我们分别对 93 个和 12 个受试者进行了训练和测试,每个受试者有 644 个切片。就 PSNR 和 MSE 而言,Restormer 似乎优于 UNet。然而,在我们的任务中,Restormer 的附加潜隐 DM 并没有带来更好的 MSE、SSIM 或 PSNR,甚至还不如传统的 UNet。此外,带有像素空间 DM 的 SR3 并不稳定,无法合成令人满意的结果。这些结果与自然图像超分辨率任务是一致的,后者也存在空间信息有限的问题。一个可能的原因是潜在特征空间的去噪迭代不能很好地支持细节结构和纹理恢复。这个问题在获取有限细节输入的红外任务中更为关键,例如 SR 和 PET 去噪。
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Ablation Study of Diffusion Model with Transformer Backbone for Low-count PET Denoising.

Diffusion models (DM) built from a hierarchy of denoising autoencoders have achieved remarkable progress in image generation, and are increasingly influential in the field of image restoration (IR) tasks. In the meantime, its backbone of autoencoders also evolved from UNet to vision transformer, e.g. Restormer. Therefore, it is important to disentangle the contribution of backbone networks and the additional generative learning scheme. Notably, DM shows varied performance across IR tasks, and the performance of recent advanced transformer-based DM on PET denoising is under-explored. In this study, we further raise an intuitive question, "{if we have a sufficiently powerful backbone, whether DM can be a general add-on generative learning scheme to further boost PET denoising}". Specifically, we investigate one of the best-in-class IR models, i.e., DiffIR, which is a latent DM based on the Restormer backbone. We provide a qualitative and quantitative comparison with UNet, SR3 (UNet+pixel DM), and Restormer, on the 25% low dose 18F-FDG whole-body PET denoising task, aiming to identify the best practices. We trained and tested on 93 and 12 subjects, and each subject has 644 slices. It appears that Restormer outperforms UNet in terms of PSNR and MSE. However, additional latent DM over Restormer does not contribute to better MSE, SSIM, or PSNR in our task, which is even inferior to the conventional UNet. In addition, SR3 with pixel space DM is not stable to synthesize satisfactory results. The results are consistent with the natural image super-resolution tasks, which also suffer from limited spatial information. A possible reason would be the denoising iteration at latent feature space cannot well support detailed structure and texture restoration. This issue is more crucial in the IR tasks taking inputs with limited details, e.g., SR and PET denoising.

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Ablation Study of Diffusion Model with Transformer Backbone for Low-count PET Denoising. Point-supervised Brain Tumor Segmentation with Box-prompted Medical Segment Anything Model. Subject-aware PET Denoising with Contrastive Adversarial Domain Generalization. Calibration Methodology of an Edgeless PET System Prototype. Tensor Tomography of Dark Field Scatter using X-ray Interferometry with Bi-prisms.
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