Benjamin W Nash, Tomás M Fernandes, Joshua A J Burton, Leonor Morgado, Jessica H van Wonderen, Dimitri A Svistunenko, Marcus J Edwards, Carlos A Salgueiro, Julea N Butt, Thomas A Clarke
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引用次数: 0
摘要
数十年的研究描述了无数氧化还原酶,这些酶包含的辅助因子排列成紧密的链条,有利于快速和受控的蛋白内电子传递。许多此类酶参与细胞外电子传递(EET),这一过程使微生物能够利用矿物氧化物和其他细胞外底物作为终端电子受体,从而在缺氧环境中保存能量。在这项工作中,我们描述了来自硫化琥珀芽孢杆菌(Geobacter sulfurreducens)的三价细胞色素 PgcA 的特性。PgcA 已被证明在 EET 中发挥了重要作用,但与众不同的是,它含有三个 CXXCH 血红素结合基团,这三个基团被重复的 (PT)x 基团分隔开来,这被认为能增强与矿物表面的结合。我们结合使用了结构、电化学和生物物理技术,通过实验证明了 PgcA 可采用多种构象,在结构域 I 和结构域 III 的末端之间延伸至 180 Å,而没有紧密的辅助因子链。此外,我们还证明了其结构域 III 的独特作用,即作为矿物质还原酶,由结构域 I 和 II 进行还原。这些发现表明,PgcA 是第一种新型电子传递蛋白,其氧化还原中心之间相距约几纳米,但通过柔性连接体拴在一起,通过拴系扩散机制而不是固定、紧密的电子传递链促进电子传递。
Tethered heme domains in a triheme cytochrome allow for increased electron transport distances.
Decades of research describe myriad redox enzymes that contain cofactors arranged in tightly packed chains facilitating rapid and controlled intra-protein electron transfer. Many such enzymes participate in extracellular electron transfer (EET), a process which allows microorganisms to conserve energy in anoxic environments by exploiting mineral oxides and other extracellular substrates as terminal electron acceptors. In this work, we describe the properties of the triheme cytochrome PgcA from Geobacter sulfurreducens. PgcA has been shown to play an important role in EET but is unusual in containing three CXXCH heme binding motifs that are separated by repeated (PT)x motifs, suggested to enhance binding to mineral surfaces. Using a combination of structural, electrochemical, and biophysical techniques, we experimentally demonstrate that PgcA adopts numerous conformations stretching as far as 180 Å between the ends of domains I and III, without a tightly packed cofactor chain. Furthermore, we demonstrate a distinct role for its domain III as a mineral reductase that is recharged by domains I and II. These findings show PgcA to be the first of a new class of electron transfer proteins, with redox centers separated by some nanometers but tethered together by flexible linkers, facilitating electron transfer through a tethered diffusion mechanism rather than a fixed, closely packed electron transfer chain.
期刊介绍:
Protein Science, the flagship journal of The Protein Society, is a publication that focuses on advancing fundamental knowledge in the field of protein molecules. The journal welcomes original reports and review articles that contribute to our understanding of protein function, structure, folding, design, and evolution.
Additionally, Protein Science encourages papers that explore the applications of protein science in various areas such as therapeutics, protein-based biomaterials, bionanotechnology, synthetic biology, and bioelectronics.
The journal accepts manuscript submissions in any suitable format for review, with the requirement of converting the manuscript to journal-style format only upon acceptance for publication.
Protein Science is indexed and abstracted in numerous databases, including the Agricultural & Environmental Science Database (ProQuest), Biological Science Database (ProQuest), CAS: Chemical Abstracts Service (ACS), Embase (Elsevier), Health & Medical Collection (ProQuest), Health Research Premium Collection (ProQuest), Materials Science & Engineering Database (ProQuest), MEDLINE/PubMed (NLM), Natural Science Collection (ProQuest), and SciTech Premium Collection (ProQuest).