确定对 SARS-CoV-2、SARS-CoV-1 和相关沙棘病毒具有交叉反应性的抗体的功能活性。

IF 5.5 1区 医学 Q1 MICROBIOLOGY PLoS Pathogens Pub Date : 2024-10-28 eCollection Date: 2024-10-01 DOI:10.1371/journal.ppat.1012650
Felicitas Ruiz, William B Foreman, Michelle Lilly, Viren A Baharani, Delphine M Depierreux, Vrasha Chohan, Ashley L Taylor, Jamie Guenthoer, Duncan Ralph, Frederick A Matsen Iv, Helen Y Chu, Paul D Bieniasz, Marceline Côté, Tyler N Starr, Julie Overbaugh
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引用次数: 0

摘要

致病性冠状病毒的反复蔓延以及沙巴病毒(如SARS-CoV-2)在人类体内快速进化的能力,突出表明我们需要更好地了解这一病毒家族的免疫反应。为此,我们鉴定了针对尖峰糖蛋白受体结合域(RBD)的抗体的功能广度和效力,这些抗体对 SARS-CoV-2 变体、SARS-CoV-1 和来自不同支系和动物源的沙棘病毒具有交叉反应性,并具有溢出潜力。一种名为 C68.61 的中和抗体对 SARS-CoV-2 变体和不同支系的沙棘病毒都有显著的中和广度。C68.61 的靶标是一个保守的 RBD 5 类表位,它在培养过程中不会选择 SARS-CoV-2 或 SARS-CoV-1 的逃逸变种,也不会在循环的 SARS-CoV-2 株系中出现预测的逃逸变种,这表明该表位在功能上受到限制。我们还发现了 11 种 SARS-CoV-2/SARS-CoV-1 交叉反应抗体,它们针对的是 RBD 中序列更保守的第 4 类和第 5 类表位,对不同的沙巴病毒显示出活性,其中一种抗体与所测试的每一种沙巴病毒 RBD 都有结合。这些抗体中的一部分表现出 Fc 介导的效应功能,与影响动物模型感染结果的抗体一样有效。因此,我们的研究发现了针对SARS-CoV-2变体和沙棘病毒保守区域的抗体,这些抗体可作为大流行病防备的治疗药物,也可作为设计能引起交叉中和反应的免疫原的蓝图。
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Delineating the functional activity of antibodies with cross-reactivity to SARS-CoV-2, SARS-CoV-1 and related sarbecoviruses.

The recurring spillover of pathogenic coronaviruses and demonstrated capacity of sarbecoviruses, such SARS-CoV-2, to rapidly evolve in humans underscores the need to better understand immune responses to this virus family. For this purpose, we characterized the functional breadth and potency of antibodies targeting the receptor binding domain (RBD) of the spike glycoprotein that exhibited cross-reactivity against SARS-CoV-2 variants, SARS-CoV-1 and sarbecoviruses from diverse clades and animal origins with spillover potential. One neutralizing antibody, C68.61, showed remarkable neutralization breadth against both SARS-CoV-2 variants and viruses from different sarbecovirus clades. C68.61, which targets a conserved RBD class 5 epitope, did not select for escape variants of SARS-CoV-2 or SARS-CoV-1 in culture nor have predicted escape variants among circulating SARS-CoV-2 strains, suggesting this epitope is functionally constrained. We identified 11 additional SARS-CoV-2/SARS-CoV-1 cross-reactive antibodies that target the more sequence conserved class 4 and class 5 epitopes within RBD that show activity against a subset of diverse sarbecoviruses with one antibody binding every single sarbecovirus RBD tested. A subset of these antibodies exhibited Fc-mediated effector functions as potent as antibodies that impact infection outcome in animal models. Thus, our study identified antibodies targeting conserved regions across SARS-CoV-2 variants and sarbecoviruses that may serve as therapeutics for pandemic preparedness as well as blueprints for the design of immunogens capable of eliciting cross-neutralizing responses.

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PLoS Pathogens
PLoS Pathogens MICROBIOLOGY-PARASITOLOGY
自引率
3.00%
发文量
598
期刊介绍: Bacteria, fungi, parasites, prions and viruses cause a plethora of diseases that have important medical, agricultural, and economic consequences. Moreover, the study of microbes continues to provide novel insights into such fundamental processes as the molecular basis of cellular and organismal function.
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