PHA4GE 微生物数据共享协议:建立基线共识微生物数据共享规范,促进跨部门合作。

IF 7.1 2区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH BMJ Global Health Pub Date : 2024-10-30 DOI:10.1136/bmjgh-2024-016474
Emma J Griffiths, Peter van Heusden, Tsaone Tamuhla, Eddie T Lulamba, Anja Bedeker, Michelle Nichols, Alan Christoffels, Nicki Tiffin
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引用次数: 0

摘要

微生物数据共享是循证微生物研究以及对公共卫生至关重要的病原体监测和分析的基础。虽然在 SARS-CoV-2 大流行期间强调了数据共享的必要性,但一些有关二次数据使用的问题也浮出水面。虽然有数据共享的一般指导原则,但我们注意到目前还没有一套既定的、通用的、明确的和易于理解的原则来指导微生物数据的二次使用。在此,我们提出了基因组流行病学公共卫生联盟(PHA4GE)微生物数据共享协议,以整合微生物数据二次使用的共识规范和公认实践。该协议提供了一套简单的七项基本原则,以解决提供微生物数据集供二次使用的研究人员可能遇到的主要问题,并指导数据用户负责任地使用数据。通过为微生物数据的二次使用提供明确的规则,该协议可以增强数据提供者共享数据的信心,并在二次分析过程中防止数据被滥用。
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The PHA4GE Microbial Data-Sharing Accord: establishing baseline consensus microbial data-sharing norms to facilitate cross-sectoral collaboration.

Microbial data sharing underlies evidence-based microbial research, as well as pathogen surveillance and analysis essential to public health. While the need for data sharing was highlighted during the SARS-CoV-2 pandemic, some concerns regarding secondary data use have also surfaced. Although general guidelines are available for data sharing, we note the absence of a set of established, universal, unambiguous and accessible principles to guide the secondary use of microbial data. Here, we propose the Public Health Alliance for Genomic Epidemiology (PHA4GE) Microbial Data-Sharing Accord to consolidate consensus norms and accepted practices for the secondary use of microbial data. The Accord provides a set of seven simple, baseline principles to address key concerns that may arise for researchers providing microbial datasets for secondary use and to guide responsible use by data users. By providing clear rules for secondary use of microbial data, the Accord can increase confidence in sharing by data providers and protect against data mis-use during secondary analyses.

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来源期刊
BMJ Global Health
BMJ Global Health Medicine-Health Policy
CiteScore
11.40
自引率
4.90%
发文量
429
审稿时长
18 weeks
期刊介绍: BMJ Global Health is an online Open Access journal from BMJ that focuses on publishing high-quality peer-reviewed content pertinent to individuals engaged in global health, including policy makers, funders, researchers, clinicians, and frontline healthcare workers. The journal encompasses all facets of global health, with a special emphasis on submissions addressing underfunded areas such as non-communicable diseases (NCDs). It welcomes research across all study phases and designs, from study protocols to phase I trials to meta-analyses, including small or specialized studies. The journal also encourages opinionated discussions on controversial topics.
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