{"title":"从豹纹珊瑚石斑鱼(Plectropomus leopardus)鳃中分离出的新型放线菌 Microbispora maris sp.","authors":"Huan Xie, Qing-Yi Xie, Qing-Yun Ma, Li Yang, Hao-Fu Dai, You-Xing Zhao, Yu-E Hao","doi":"10.1099/ijsem.0.006568","DOIUrl":null,"url":null,"abstract":"<p><p>A novel actinomycete, designated strain ZYX-F-249<sup>T</sup>, was isolated from the gill of a leopard coral grouper in Yongxing Island, Hainan Province, China. Based on 16S rRNA gene sequence analysis, strain ZYX-F-249<sup>T</sup> belonged to the genus <i>Microbispora</i>, with high similarities to <i>Microbispora rosea</i> ATCC 12950<sup>T</sup> (98.7 %), <i>Microbispora hainanensis</i> 211020<sup>T</sup> (98.5 %), <i>Microbispora clausenae</i> CLES2<sup>T</sup> (98.4 %), <i>Microbispora bryophytorum</i> NEAU-TX2-2<sup>T</sup> (98.1 %) and <i>Microbispora oryzae</i>RL4-1S<sup>T</sup> (98.0 %). Phylogenetic analysis of the 16S rRNA gene sequence of strain ZYX-F-249<sup>T</sup> showed that the strain formed a stable subclade with <i>Microbispora rosea</i> ATCC 12950<sup>T</sup> in the genus <i>Microbispora</i>. The cell wall of the novel isolate contained <i>meso</i>-diaminopimelic acid, while whole-cell sugars were madurose, glucose and ribose. The predominant menaquinones were MK-9(H<sub>6</sub>), MK-9(H<sub>4</sub>), MK-9(H<sub>2</sub>) and MK-9(H<sub>0</sub>). The characteristic phospholipids (PLs) were phosphatidylethanolamine, phosphatidylinositol, diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylinositol mannoside, glycophospholipids and an unknown PL. The major cellular fatty acids (>10%) were <i>iso</i>-C<sub>16 : 0</sub> and <i>iso</i>-C<sub>18 : 0</sub>. Genome sequencing showed a DNA G+C content of 71.6%. The low average nucleotide identity, digital DNA-DNA hybridization and average amino acid identity values demonstrated that strain ZYX-F-249<sup>T</sup> could be readily distinguished from closely related species. Based on data from these phylogenetic, chemotaxonomic and physiological characteristics, strain ZYX-F-249<sup>T</sup> represents a novel species of the genus <i>Microbispora</i>, for which the name <i>Microbispora maris</i> sp. nov. is proposed. The type strain is ZYX-F-249<sup>T</sup> (=CCTCC AA 2023030<sup>T</sup> =JCM 36778<sup>T</sup>).</p>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Microbispora maris</i> sp. nov., a novel actinobacterium isolated from the gill of the leopard coral grouper (<i>Plectropomus leopardus</i>).\",\"authors\":\"Huan Xie, Qing-Yi Xie, Qing-Yun Ma, Li Yang, Hao-Fu Dai, You-Xing Zhao, Yu-E Hao\",\"doi\":\"10.1099/ijsem.0.006568\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>A novel actinomycete, designated strain ZYX-F-249<sup>T</sup>, was isolated from the gill of a leopard coral grouper in Yongxing Island, Hainan Province, China. Based on 16S rRNA gene sequence analysis, strain ZYX-F-249<sup>T</sup> belonged to the genus <i>Microbispora</i>, with high similarities to <i>Microbispora rosea</i> ATCC 12950<sup>T</sup> (98.7 %), <i>Microbispora hainanensis</i> 211020<sup>T</sup> (98.5 %), <i>Microbispora clausenae</i> CLES2<sup>T</sup> (98.4 %), <i>Microbispora bryophytorum</i> NEAU-TX2-2<sup>T</sup> (98.1 %) and <i>Microbispora oryzae</i>RL4-1S<sup>T</sup> (98.0 %). Phylogenetic analysis of the 16S rRNA gene sequence of strain ZYX-F-249<sup>T</sup> showed that the strain formed a stable subclade with <i>Microbispora rosea</i> ATCC 12950<sup>T</sup> in the genus <i>Microbispora</i>. The cell wall of the novel isolate contained <i>meso</i>-diaminopimelic acid, while whole-cell sugars were madurose, glucose and ribose. The predominant menaquinones were MK-9(H<sub>6</sub>), MK-9(H<sub>4</sub>), MK-9(H<sub>2</sub>) and MK-9(H<sub>0</sub>). The characteristic phospholipids (PLs) were phosphatidylethanolamine, phosphatidylinositol, diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylinositol mannoside, glycophospholipids and an unknown PL. The major cellular fatty acids (>10%) were <i>iso</i>-C<sub>16 : 0</sub> and <i>iso</i>-C<sub>18 : 0</sub>. Genome sequencing showed a DNA G+C content of 71.6%. The low average nucleotide identity, digital DNA-DNA hybridization and average amino acid identity values demonstrated that strain ZYX-F-249<sup>T</sup> could be readily distinguished from closely related species. Based on data from these phylogenetic, chemotaxonomic and physiological characteristics, strain ZYX-F-249<sup>T</sup> represents a novel species of the genus <i>Microbispora</i>, for which the name <i>Microbispora maris</i> sp. nov. is proposed. The type strain is ZYX-F-249<sup>T</sup> (=CCTCC AA 2023030<sup>T</sup> =JCM 36778<sup>T</sup>).</p>\",\"PeriodicalId\":2,\"journal\":{\"name\":\"ACS Applied Bio Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.6000,\"publicationDate\":\"2024-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Bio Materials\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006568\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MATERIALS SCIENCE, BIOMATERIALS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Bio Materials","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006568","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATERIALS SCIENCE, BIOMATERIALS","Score":null,"Total":0}
Microbispora maris sp. nov., a novel actinobacterium isolated from the gill of the leopard coral grouper (Plectropomus leopardus).
A novel actinomycete, designated strain ZYX-F-249T, was isolated from the gill of a leopard coral grouper in Yongxing Island, Hainan Province, China. Based on 16S rRNA gene sequence analysis, strain ZYX-F-249T belonged to the genus Microbispora, with high similarities to Microbispora rosea ATCC 12950T (98.7 %), Microbispora hainanensis 211020T (98.5 %), Microbispora clausenae CLES2T (98.4 %), Microbispora bryophytorum NEAU-TX2-2T (98.1 %) and Microbispora oryzaeRL4-1ST (98.0 %). Phylogenetic analysis of the 16S rRNA gene sequence of strain ZYX-F-249T showed that the strain formed a stable subclade with Microbispora rosea ATCC 12950T in the genus Microbispora. The cell wall of the novel isolate contained meso-diaminopimelic acid, while whole-cell sugars were madurose, glucose and ribose. The predominant menaquinones were MK-9(H6), MK-9(H4), MK-9(H2) and MK-9(H0). The characteristic phospholipids (PLs) were phosphatidylethanolamine, phosphatidylinositol, diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylinositol mannoside, glycophospholipids and an unknown PL. The major cellular fatty acids (>10%) were iso-C16 : 0 and iso-C18 : 0. Genome sequencing showed a DNA G+C content of 71.6%. The low average nucleotide identity, digital DNA-DNA hybridization and average amino acid identity values demonstrated that strain ZYX-F-249T could be readily distinguished from closely related species. Based on data from these phylogenetic, chemotaxonomic and physiological characteristics, strain ZYX-F-249T represents a novel species of the genus Microbispora, for which the name Microbispora maris sp. nov. is proposed. The type strain is ZYX-F-249T (=CCTCC AA 2023030T =JCM 36778T).