解密 CCL4-CCR5 在冠状动脉疾病发病机制中的作用:孟德尔随机化、大量 RNA 测序、单细胞 RNA 和临床验证的启示。

IF 3.2 3区 医学 Q1 MEDICINE, GENERAL & INTERNAL International Journal of Medical Sciences Pub Date : 2024-10-14 eCollection Date: 2024-01-01 DOI:10.7150/ijms.99518
ZiAn Feng, Hui Li, Nan Chen, Kai Xu, BuChun Zhang
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引用次数: 0

摘要

背景:循环中 CCL4 水平的变化与冠状动脉疾病(CAD)有关,但其因果关系和内在机制仍不清楚。研究目的本研究旨在利用孟德尔随机化(MR)分析、大容量 RNA 和单细胞 RNA 测序(scRNA-seq)分析 CCL4 及其受体(CCR5)在 CAD 中的作用。方法:利用 MR 分析确定 91 种循环炎症蛋白与 CAD 之间的因果关系。批量 RNA 测序数据用于证明 CCL4/CCR5 的表达谱。利用 scRNA-seq 数据确定了 CCL4/CCR5 的定位。功能富集分析用于推断 CCL4 在 CAD 中的潜在作用。利用其他临床样本验证了 MR 的结果。结果:我们发现了六种与 CAD 相关的循环炎症蛋白。基因表达总集(GEO)数据集中的大量 RNA 测序数据显示,与对照组相比,CCR4 受体(CCR5)在人类动脉粥样硬化斑块中的表达量明显更高。值得注意的是,scRNA-seq分析显示CCL4在T细胞、单核细胞和巨噬细胞中高表达。功能富集分析显示,CCL4 主要富集在细胞因子和细胞因子受体、带有细胞因子和细胞因子受体的病毒蛋白以及趋化因子信号通路中。结论我们的研究从遗传学角度揭示了CCL4-CCR5在CAD中的致病作用,为进一步研究炎性细胞因子介导的CAD的机理和临床研究提供了新的思路。
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Deciphering the role of CCL4-CCR5 in coronary artery disease pathogenesis: insights from Mendelian randomization, bulk RNA sequencing, single-cell RNA, and clinical validation.

Background: Alterations in circulating CCL4 levels have been implicated in coronary artery disease (CAD), but the causal relationship and underlying mechanisms remain unclear. Objective: This study aims to analyse the role of CCL4 and its receptor (CCR5) in CAD using Mendelian randomisation (MR) analysis, bulk RNA and single cell RNA sequencing (scRNA-seq). Methods: The MR analysis was used to determine the causal relationship between 91 circulating inflammatory proteins and CAD. Bulk RNA sequencing data was used to demonstrate the expression profile of CCL4/CCR5. The localisation of CCL4/CCR5 was determined using scRNA-seq data. Functional enrichment analyses were used to infer the potential role of CCL4 in CAD. Additional clinical samples were utilized to validate the results of MR. Results: We identified six circulating inflammatory proteins associated with CAD. Of these, CCL4 was identified as a key inflammatory cytokine associated with CAD risk for MR analysis.The bulk RNA sequencing data from the Gene Expression Omnibus (GEO) datasets showed that CCR4 receptor(CCR5) expression was significantly higher in human atherosclerotic plaques compared to controls. Notably, scRNA-seq analysis revealed CCL4 was highly expressed in T cells, monocytes and macrophages. Clinical specimens confirmed high levels of serum CCL4 expression in CAD patients by ELISA.Functional enrichment analysis revealed that CCL4 was primarily enriched in the cytokines and cytokine receptors, viral proteins with cytokines and cytokine receptors, and chemokine signaling pathways. Conclusion: Our study presented a genetic insight into the pathogenetic role of CCL4-CCR5 in CAD, which may provide new insights for further mechanistic and clinical investigations of inflammatory cytokine-mediated CAD.

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来源期刊
International Journal of Medical Sciences
International Journal of Medical Sciences MEDICINE, GENERAL & INTERNAL-
CiteScore
7.20
自引率
0.00%
发文量
185
审稿时长
2.7 months
期刊介绍: Original research papers, reviews, and short research communications in any medical related area can be submitted to the Journal on the understanding that the work has not been published previously in whole or part and is not under consideration for publication elsewhere. Manuscripts in basic science and clinical medicine are both considered. There is no restriction on the length of research papers and reviews, although authors are encouraged to be concise. Short research communication is limited to be under 2500 words.
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