推进鹰嘴豆育种:针对非生物胁迫缓解和基因强化的 Omics 见解。

IF 2.1 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical Genetics Pub Date : 2024-11-12 DOI:10.1007/s10528-024-10954-8
Muhammad Tanveer Altaf, Waqas Liaqat, Amjad Ali, Amna Jamil, Muhammad Fahad, Muhammad Aneeq Ur Rahman, Faheem Shehzad Baloch, Heba I Mohamed
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引用次数: 0

摘要

鹰嘴豆是蛋白质的主要来源,被认为是经济上最重要的食用豆类。鹰嘴豆生产在全球范围内受到多种非生物和生物因素的威胁。限制全球鹰嘴豆生产的主要因素是干旱、炎热、盐碱和寒冷等非生物条件。很明显,鹰嘴豆因其营养价值,尤其是高蛋白含量而备受珍视,因此对干旱、寒冷和盐分胁迫等问题的研究对鹰嘴豆非常重要。在这方面,我们回顾了几种生理、生化和分子机制来赋予鹰嘴豆对非生物性胁迫的耐受性。农业中最严重的经济损失就是这些非生物胁迫造成的,它们以多种方式影响着植物。所有这些非生物胁迫都会在细胞水平和整个植物水平上影响植物的水分关系,引起特异性和非特异性反应、损害和适应反应。这些胁迫具有共同的特点。育种计划以超过 100,000 个鹰嘴豆品种为基础。通过这种方法,常规育种取得了重大进展,包括诱变、基因/等位基因导入和种质引进。由于高通量测序和分子生物学的发展,为鹰嘴豆属建立独特的 DNA 标记使非生物耐受性和产量成分的选择变得更加容易。转录组学、蛋白质组学和代谢组学也使得确定与鹰嘴豆耐受非生物胁迫有关的特定基因、蛋白质和代谢物成为可能。鹰嘴豆对非生物胁迫的耐受性已通过生物技术应用得到了直接和潜在的改善,所有 "Omics "方法都涵盖了这一点。这需要不同分子水平的非生物胁迫反应信息,包括代谢物或蛋白质的基因表达分析及其对表型的影响。对鹰嘴豆进行了全基因组表达谱分析研究,以确定重要的候选基因及其对非生物胁迫响应的调控网络。本研究旨在详细概述鹰嘴豆植物抗非生物性胁迫的各种 "Omics "方法。
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Advancing Chickpea Breeding: Omics Insights for Targeted Abiotic Stress Mitigation and Genetic Enhancement.

Chickpea is a major source of proteins and is considered the most economically vital food legume. Chickpea production is threatened by several abiotic and biotic factors worldwide. The main constraints limiting worldwide chickpea production are abiotic conditions such as drought, heat, salinity, and cold. It is clear that chickpea is treasured for its nutritive value, in particular its high protein content, and hence study of problems like drought, cold and salinity stresses are very important concerning chickpeas. In this regard, several physiological, biochemical, and molecular mechanisms are reviewed to confer tolerance to abiotic stress. The most crippling economic losses in agriculture occur due to these abiotic stressors, which affect plants in many ways. All these abiotic stresses affect the water relations of the plant, both at the cellular level as well as the whole-plant level, causing both specific and non-specific reactions, damage and adaptation reactions. These stresses share common features. Breeding programs use a huge collection of over 100,000 chickpea accessions as their foundation. Significant advancements in conventional breeding, including mutagenesis, gene/allele introgression, and germplasm introduction, have been made through this method. Abiotic tolerance and yield component selection are made easier by creating unique DNA markers for the genus Cicer, which has been made possible by developments in high-throughput sequencing and molecular biology. Transcriptomics, proteomics, and metabolomics have also made it possible to identify particular genes, proteins, and metabolites linked to chickpea tolerance to abiotic stress. Chickpea abiotic stress tolerance has been directly and potentially improved by biotechnological applications, which are covered by all 'Omics' approaches. It requires information on the abiotic stress response at the different molecular levels, which comprises gene expression analysis for metabolites or proteins and its impact on phenotype. Studies on chickpea genome-wide expression profiling have been conducted to determine important candidate genes and their regulatory networks for abiotic stress response. This study aimed to offer a detailed overview of the diverse 'Omics' approaches for resilience's to abiotic stresses on chickpea plants.

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来源期刊
Biochemical Genetics
Biochemical Genetics 生物-生化与分子生物学
CiteScore
3.90
自引率
0.00%
发文量
133
审稿时长
4.8 months
期刊介绍: Biochemical Genetics welcomes original manuscripts that address and test clear scientific hypotheses, are directed to a broad scientific audience, and clearly contribute to the advancement of the field through the use of sound sampling or experimental design, reliable analytical methodologies and robust statistical analyses. Although studies focusing on particular regions and target organisms are welcome, it is not the journal’s goal to publish essentially descriptive studies that provide results with narrow applicability, or are based on very small samples or pseudoreplication. Rather, Biochemical Genetics welcomes review articles that go beyond summarizing previous publications and create added value through the systematic analysis and critique of the current state of knowledge or by conducting meta-analyses. Methodological articles are also within the scope of Biological Genetics, particularly when new laboratory techniques or computational approaches are fully described and thoroughly compared with the existing benchmark methods. Biochemical Genetics welcomes articles on the following topics: Genomics; Proteomics; Population genetics; Phylogenetics; Metagenomics; Microbial genetics; Genetics and evolution of wild and cultivated plants; Animal genetics and evolution; Human genetics and evolution; Genetic disorders; Genetic markers of diseases; Gene technology and therapy; Experimental and analytical methods; Statistical and computational methods.
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