从 Suaeda japonica 群体的泥滩中分离出的 Aurantiacibacter flavus sp.

IF 2 3区 生物学 Q4 MICROBIOLOGY International journal of systematic and evolutionary microbiology Pub Date : 2024-11-01 DOI:10.1099/ijsem.0.006578
Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
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引用次数: 0

摘要

从大韩民国仁川 Suaeda japonica 群体的泥滩中分离出两株新菌株。这两株菌株被命名为 DGU5T 和 DGU6T,均为革兰氏染色阴性、兼性厌氧、杆状,菌落呈淡黄色。通过对这两株菌株的 16S rRNA 序列和基因组草案进行系统进化分析,确定它们属于金黄杆菌属。菌株 DGU5T 的细胞不运动,生长温度为 7-45℃(最适温度为 25-30℃),pH 值为 6.0-10.0(最适 pH 值为 7.0-8.0),NaCl 含量为 0-11.0%(最适 NaCl 含量为 2.0%)。菌株 DGU6T 的细胞无运动性,可在 10-45 ℃(最佳温度为 30-35℃)、pH 值为 3.0-10.0(最佳温度为 7.0-8.0)和 0-11.0% NaCl(最佳浓度为 2.0%)的条件下生长。整体基因组亲缘关系指数计算显示,其平均核苷酸同一性值(72.3-88.6%)和数字 DNA-DNA 杂交值(18.8-35.9%)与 Aurantiacibacter 属的核苷酸同一性值和数字 DNA-DNA 杂交值一致。两株菌株的主要脂肪酸为 C17:1 ω6c 和总特征 8(C18:1 ω6c/C18:1 ω7c),主要极性脂质为鞘氨醇甘油酯、磷脂酰甘油和二磷脂酰甘油。系统发育、平均核苷酸同一性、数字 DNA-DNA 杂交、生理和生化数据共同证明了这些新菌株与赤霉菌科其他成员的不同之处。我们建议将这两株菌株命名为 A. flavus sp.nov.(模式菌株 DGU5T = KACC 23720T = TBRC 19015T)和 A. gilvus sp.nov.(模式菌株 DGU6T = KACC 23721T = TBRC 19016T)。
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Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies.

Two novel strains were isolated from the mudflat of Suaeda japonica colonies in Incheon, Republic of Korea. Designated as DGU5T and DGU6T, these strains were Gram-stain-negative, facultatively anaerobic and rod-shaped and had yellowish colonies. Both strains were determined to belong to the genus Aurantiacibacter through phylogenetic analysis of their 16S rRNA sequences and draft genomes. The cells of strain DGU5T were non-motile and grew at temperatures ranging between 7-45°C (optimum, 25-30°C), pH 6.0-10.0 (optimum, 7.0-8.0) and in the presence of 0-11.0% NaCl (optimum, 2.0%). The cells of strain DGU6T were non-motile and grew in temperatures ranging from 10-45 °C (optimum, 30-35°C), pH 3.0-10.0 (optimum, 7.0-8.0) and in the presence of 0-11.0% NaCl (optimum, 2.0%). Overall genome relatedness index calculations revealed average nucleotide identity values (72.3-88.6%) and digital DNA-DNA hybridization values (18.8-35.9%) aligning with those of the genus Aurantiacibacter. The major fatty acids in both strains were C17:1 ω6c and summed feature 8 (C18:1 ω6c/C18:1 ω7c), while the predominant polar lipids were sphingoglycolipid, phosphatidylglycerol, and diphosphatidylglycerol. Phylogenetic, average nucleotide identity, digital DNA-DNA hybridization, physiological, and biochemical data collectively demonstrated the distinctiveness of the novel strains from other members within the family Erythrobacteraceae. We propose the names A. flavus sp. nov. (type strain DGU5T = KACC 23720T = TBRC 19015T) and A. gilvus sp. nov. (type strain DGU6T = KACC 23721T = TBRC 19016T) for the two strains.

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
期刊最新文献
Corrigendum. Proposal of Lactobacillus amylovorus subsp. animalis subsp. nov. and an emended description of Lactobacillus amylovorus. Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 74, part 7 of the IJSEM. Bifidobacterium favimelis sp. nov., isolated from black comb honey. Microbispora maris sp. nov., a novel actinobacterium isolated from the gill of the leopard coral grouper (Plectropomus leopardus). International Committee on Systematics of Prokaryotes: subcommittee on the taxonomy of methanogenic archaea. Minutes of the closed, online meeting held 06 September 2023.
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