Jinjie Guo , Tao Feng , Penghu Wei , Jinguo Huang , Yanfeng Yang , Yiping Wang , Gongpeng Cao , Yuda Huang , Guixia Kang , Guoguang Zhao
{"title":"利用 SEEG 数据进行自适应图形学习以改进癫痫发作定位:考虑通用性和简便性","authors":"Jinjie Guo , Tao Feng , Penghu Wei , Jinguo Huang , Yanfeng Yang , Yiping Wang , Gongpeng Cao , Yuda Huang , Guixia Kang , Guoguang Zhao","doi":"10.1016/j.bspc.2024.107148","DOIUrl":null,"url":null,"abstract":"<div><div>Accurate localization of seizure onset zones (SOZs) in patients with drug-resistant epilepsy is essential for improving prognostic outcomes. This process can be significantly enhanced through effective network representation and analysis of functional dependencies among brain regions. However, traditional network construction methods often lack generalizability due to individual variability. Furthermore, the independent design of the network construction and analysis modules restricts the overall optimization of localization frameworks. In this study, we propose a novel deep learning framework that integrates graph building and analysis modules for seizure localization. The graph building block adaptively generates customized network representations from Stereo-Electroencephalography (SEEG) data of individual patients by extracting feature vectors of each channel and calculating functional connectivity weights among channels with these vectors. While the GCN-and-LSTM-based graph analysis block identifies abnormal nodes corresponding to SOZs by aggregating spatial and temporal information in the network representations. The graph analysis block is trained alongside the graph building block via the seizure prediction task. Attention weights assigned to each channel are utilized to characterize epileptogenicity, facilitating precise localization of the SOZ. Our method demonstrates superior performance, surpassing baseline and state-of-the-art approaches in 9 of 13 patients from a public dataset and 11 of 14 patients from a clinical dataset. Visualization of the identified brain regions aligns well with labeled SOZs. Furthermore, the adaptive functional brain network reveals that the connectivity density among SOZ channels is greater than that of other brain regions, corroborating existing clinical findings and further confirming the model’s reliability and interpretability.</div></div>","PeriodicalId":55362,"journal":{"name":"Biomedical Signal Processing and Control","volume":"101 ","pages":"Article 107148"},"PeriodicalIF":4.9000,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Adaptive graph learning with SEEG data for improved seizure localization: Considerations of generalization and simplicity\",\"authors\":\"Jinjie Guo , Tao Feng , Penghu Wei , Jinguo Huang , Yanfeng Yang , Yiping Wang , Gongpeng Cao , Yuda Huang , Guixia Kang , Guoguang Zhao\",\"doi\":\"10.1016/j.bspc.2024.107148\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Accurate localization of seizure onset zones (SOZs) in patients with drug-resistant epilepsy is essential for improving prognostic outcomes. This process can be significantly enhanced through effective network representation and analysis of functional dependencies among brain regions. However, traditional network construction methods often lack generalizability due to individual variability. Furthermore, the independent design of the network construction and analysis modules restricts the overall optimization of localization frameworks. In this study, we propose a novel deep learning framework that integrates graph building and analysis modules for seizure localization. The graph building block adaptively generates customized network representations from Stereo-Electroencephalography (SEEG) data of individual patients by extracting feature vectors of each channel and calculating functional connectivity weights among channels with these vectors. While the GCN-and-LSTM-based graph analysis block identifies abnormal nodes corresponding to SOZs by aggregating spatial and temporal information in the network representations. The graph analysis block is trained alongside the graph building block via the seizure prediction task. Attention weights assigned to each channel are utilized to characterize epileptogenicity, facilitating precise localization of the SOZ. Our method demonstrates superior performance, surpassing baseline and state-of-the-art approaches in 9 of 13 patients from a public dataset and 11 of 14 patients from a clinical dataset. Visualization of the identified brain regions aligns well with labeled SOZs. Furthermore, the adaptive functional brain network reveals that the connectivity density among SOZ channels is greater than that of other brain regions, corroborating existing clinical findings and further confirming the model’s reliability and interpretability.</div></div>\",\"PeriodicalId\":55362,\"journal\":{\"name\":\"Biomedical Signal Processing and Control\",\"volume\":\"101 \",\"pages\":\"Article 107148\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2024-11-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomedical Signal Processing and Control\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1746809424012060\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical Signal Processing and Control","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1746809424012060","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
Adaptive graph learning with SEEG data for improved seizure localization: Considerations of generalization and simplicity
Accurate localization of seizure onset zones (SOZs) in patients with drug-resistant epilepsy is essential for improving prognostic outcomes. This process can be significantly enhanced through effective network representation and analysis of functional dependencies among brain regions. However, traditional network construction methods often lack generalizability due to individual variability. Furthermore, the independent design of the network construction and analysis modules restricts the overall optimization of localization frameworks. In this study, we propose a novel deep learning framework that integrates graph building and analysis modules for seizure localization. The graph building block adaptively generates customized network representations from Stereo-Electroencephalography (SEEG) data of individual patients by extracting feature vectors of each channel and calculating functional connectivity weights among channels with these vectors. While the GCN-and-LSTM-based graph analysis block identifies abnormal nodes corresponding to SOZs by aggregating spatial and temporal information in the network representations. The graph analysis block is trained alongside the graph building block via the seizure prediction task. Attention weights assigned to each channel are utilized to characterize epileptogenicity, facilitating precise localization of the SOZ. Our method demonstrates superior performance, surpassing baseline and state-of-the-art approaches in 9 of 13 patients from a public dataset and 11 of 14 patients from a clinical dataset. Visualization of the identified brain regions aligns well with labeled SOZs. Furthermore, the adaptive functional brain network reveals that the connectivity density among SOZ channels is greater than that of other brain regions, corroborating existing clinical findings and further confirming the model’s reliability and interpretability.
期刊介绍:
Biomedical Signal Processing and Control aims to provide a cross-disciplinary international forum for the interchange of information on research in the measurement and analysis of signals and images in clinical medicine and the biological sciences. Emphasis is placed on contributions dealing with the practical, applications-led research on the use of methods and devices in clinical diagnosis, patient monitoring and management.
Biomedical Signal Processing and Control reflects the main areas in which these methods are being used and developed at the interface of both engineering and clinical science. The scope of the journal is defined to include relevant review papers, technical notes, short communications and letters. Tutorial papers and special issues will also be published.