{"title":"设计、合成基于抗吡啶的席夫碱,并通过体外和硅学方法研究其胆碱酯酶和碳酸酐酶活性","authors":"Reşit Çakmak , Eyüp Başaran , Burçin Türkmenoğlu , Murat Şentürk","doi":"10.1016/j.molstruc.2024.140599","DOIUrl":null,"url":null,"abstract":"<div><div>In this study, a series of antipyrine-based Schiff bases (<strong>1</strong>–<strong>10</strong>) was designed, synthesized, and evaluated as potential inhibitors of various metabolic enzymes, including acetylcholinesterase (AChE), butyrylcholinesterase (BChE), and human erythrocyte carbonic anhydrase I and II (hCA I and hCA II). The target molecules were characterized by UV–vis, FT-IR, <sup>1</sup>H NMR, <sup>13</sup>CNMR, LC-HRMS, and elemental analysis. All tested derivatives demonstrated low nanomolar inhibition with <em>K</em><sub>i</sub> values of in the range of 20.58 ± 0.35 to 53.11 ± 1.02 nM against AChE, 21.84 ± 0.40 to 54.41 ± 1.05 nM against BChE, 27.45 ± 0.41 to 48.22 ± 0.91 nM against cytosolic hCA I isoform associated with epilepsy, and 6.02 ± 0.11 to 29.32 ± 0.54 nM against cytosolic hCA II isoform associated with glaucoma. In general, most these molecules, except for a few, inhibited these enzymes more than acetazolamide (AZA) and neostigmine. Among them, compounds <strong>5, 7, 8</strong>, and <strong>9</strong> showed the best inhibitory activities against AChE, BChE, hCA I, and hCA II, respectively. Docking results were calculated for the compounds that showed the best inhibitory activity against these enzymes and for reference compounds. Based on the molecular docking results, they were determined to have high binding energies, including hydrogen bonds, electrostatic interactions, and hydrophobic interactions. Absorption, distribution, metabolism, and excretion (ADME) parameters determined that all the synthesized pyrazolone ring-bearing Schif base derivatives (<strong>1</strong>–<strong>10</strong>) have the expected physicochemical properties in terms of drug-likeness and can be evaluated as orally active potential. Properties such as the electrophilicity index and chemical hardness were also investigated by density functional theory (DFT) at the B3LYP/6–311G** level of theory.</div></div>","PeriodicalId":16414,"journal":{"name":"Journal of Molecular Structure","volume":"1322 ","pages":"Article 140599"},"PeriodicalIF":4.0000,"publicationDate":"2024-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Design, synthesis of antipyrine-based Schiff bases and investigation of their cholinesterase and carbonic anhydrase activities by in vitro and in silico approaches\",\"authors\":\"Reşit Çakmak , Eyüp Başaran , Burçin Türkmenoğlu , Murat Şentürk\",\"doi\":\"10.1016/j.molstruc.2024.140599\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>In this study, a series of antipyrine-based Schiff bases (<strong>1</strong>–<strong>10</strong>) was designed, synthesized, and evaluated as potential inhibitors of various metabolic enzymes, including acetylcholinesterase (AChE), butyrylcholinesterase (BChE), and human erythrocyte carbonic anhydrase I and II (hCA I and hCA II). The target molecules were characterized by UV–vis, FT-IR, <sup>1</sup>H NMR, <sup>13</sup>CNMR, LC-HRMS, and elemental analysis. All tested derivatives demonstrated low nanomolar inhibition with <em>K</em><sub>i</sub> values of in the range of 20.58 ± 0.35 to 53.11 ± 1.02 nM against AChE, 21.84 ± 0.40 to 54.41 ± 1.05 nM against BChE, 27.45 ± 0.41 to 48.22 ± 0.91 nM against cytosolic hCA I isoform associated with epilepsy, and 6.02 ± 0.11 to 29.32 ± 0.54 nM against cytosolic hCA II isoform associated with glaucoma. In general, most these molecules, except for a few, inhibited these enzymes more than acetazolamide (AZA) and neostigmine. Among them, compounds <strong>5, 7, 8</strong>, and <strong>9</strong> showed the best inhibitory activities against AChE, BChE, hCA I, and hCA II, respectively. Docking results were calculated for the compounds that showed the best inhibitory activity against these enzymes and for reference compounds. Based on the molecular docking results, they were determined to have high binding energies, including hydrogen bonds, electrostatic interactions, and hydrophobic interactions. Absorption, distribution, metabolism, and excretion (ADME) parameters determined that all the synthesized pyrazolone ring-bearing Schif base derivatives (<strong>1</strong>–<strong>10</strong>) have the expected physicochemical properties in terms of drug-likeness and can be evaluated as orally active potential. Properties such as the electrophilicity index and chemical hardness were also investigated by density functional theory (DFT) at the B3LYP/6–311G** level of theory.</div></div>\",\"PeriodicalId\":16414,\"journal\":{\"name\":\"Journal of Molecular Structure\",\"volume\":\"1322 \",\"pages\":\"Article 140599\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2024-11-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Molecular Structure\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0022286024031077\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Structure","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0022286024031077","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
摘要
本研究设计、合成了一系列基于抗吡啶的希夫碱(1-10),并将其评估为各种代谢酶的潜在抑制剂,包括乙酰胆碱酯酶(AChE)、丁酰胆碱酯酶(BChE)以及人红细胞碳酸酐酶 I 和 II(hCA I 和 hCA II)。通过紫外-可见光、傅立叶变换红外光谱、1H NMR、13CNMR、LC-HRMS 和元素分析对目标分子进行了表征。所有测试的衍生物都表现出低纳摩尔的抑制作用,对 AChE 的 Ki 值范围为 20.58 ± 0.35 至 53.11 ± 1.02 nM,对 BChE 的 Ki 值范围为 21.84 ± 0.40 至 54.41 ± 1.05 nM,对 AChE 的 Ki 值范围为 27.45 ± 0.41 至 48.22 ± 0.91 nM,以及 6.02 ± 0.11 至 29.32 ± 0.54 nM,分别针对与癫痫相关的细胞膜 hCA I 异构体和与青光眼相关的细胞膜 hCA II 异构体。一般来说,除少数化合物外,大多数化合物对这些酶的抑制作用都强于乙酰唑胺(AZA)和新斯的明。其中,化合物 5、7、8 和 9 对 AChE、BChE、hCA I 和 hCA II 的抑制活性分别最好。计算了对这些酶具有最佳抑制活性的化合物和参考化合物的对接结果。根据分子对接结果,确定这些化合物具有较高的结合能,包括氢键、静电相互作用和疏水相互作用。吸收、分布、代谢和排泄(ADME)参数表明,所有合成的吡唑酮环希夫碱衍生物(1-10)都具有药物相似性方面的预期理化性质,可以被评估为具有口服活性的潜在化合物。此外,还通过密度泛函理论(DFT)在 B3LYP/6-311G** 理论水平上对亲电指数和化学硬度等性质进行了研究。
Design, synthesis of antipyrine-based Schiff bases and investigation of their cholinesterase and carbonic anhydrase activities by in vitro and in silico approaches
In this study, a series of antipyrine-based Schiff bases (1–10) was designed, synthesized, and evaluated as potential inhibitors of various metabolic enzymes, including acetylcholinesterase (AChE), butyrylcholinesterase (BChE), and human erythrocyte carbonic anhydrase I and II (hCA I and hCA II). The target molecules were characterized by UV–vis, FT-IR, 1H NMR, 13CNMR, LC-HRMS, and elemental analysis. All tested derivatives demonstrated low nanomolar inhibition with Ki values of in the range of 20.58 ± 0.35 to 53.11 ± 1.02 nM against AChE, 21.84 ± 0.40 to 54.41 ± 1.05 nM against BChE, 27.45 ± 0.41 to 48.22 ± 0.91 nM against cytosolic hCA I isoform associated with epilepsy, and 6.02 ± 0.11 to 29.32 ± 0.54 nM against cytosolic hCA II isoform associated with glaucoma. In general, most these molecules, except for a few, inhibited these enzymes more than acetazolamide (AZA) and neostigmine. Among them, compounds 5, 7, 8, and 9 showed the best inhibitory activities against AChE, BChE, hCA I, and hCA II, respectively. Docking results were calculated for the compounds that showed the best inhibitory activity against these enzymes and for reference compounds. Based on the molecular docking results, they were determined to have high binding energies, including hydrogen bonds, electrostatic interactions, and hydrophobic interactions. Absorption, distribution, metabolism, and excretion (ADME) parameters determined that all the synthesized pyrazolone ring-bearing Schif base derivatives (1–10) have the expected physicochemical properties in terms of drug-likeness and can be evaluated as orally active potential. Properties such as the electrophilicity index and chemical hardness were also investigated by density functional theory (DFT) at the B3LYP/6–311G** level of theory.
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