FSscore:基于机器学习的个性化合成可行性评分

IF 6.1 Q1 CHEMISTRY, MULTIDISCIPLINARY Chemistry methods : new approaches to solving problems in chemistry Pub Date : 2024-10-18 DOI:10.1002/cmtd.202400024
Rebecca M. Neeser, Prof. Bruno Correia, Prof. Philippe Schwaller
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引用次数: 0

摘要

确定一个分子是否可以合成是化学和药物发现中的关键,因为它可以指导新设计任务中的实验优先顺序和分子排序。现有的评估合成可行性的评分方法很难推断出新的化学空间,或者无法根据手性等细微差别进行区分。为了解决这些局限性,这项研究引入了 "聚焦合成可行性评分"(Focused Synthesizability score,FSscore),利用机器学习根据合成的相对难易程度对结构进行排序。首先,建立一个在大量反应物-产物对上进行训练的基线,然后根据专家针对特定化学空间提出的反馈意见对其进行改进。这种有针对性的微调提高了在这些化学范围内的性能,从而能够更准确地区分难合成和易合成的分子。FSscore 展示了如何利用人在环框架来优化各种化学应用的合成可行性评估。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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FSscore: A Personalized Machine Learning-Based Synthetic Feasibility Score

Determining whether a molecule can be synthesized is crucial in chemistry and drug discovery, as it guides experimental prioritization and molecule ranking in de novo design tasks. Existing scoring approaches to assess synthetic feasibility struggle to extrapolate to new chemical spaces or fail to discriminate based on subtle differences such as chirality. This work addresses these limitations by introducing the Focused Synthesizability score (FSscore), which uses machine learning to rank structures based on their relative ease of synthesis. First, a baseline trained on an extensive set of reactant-product pairs is established, which is then refined with expert human feedback tailored to specific chemical spaces. This targeted fine-tuning improves performance on these chemical scopes, enabling more accurate differentiation between molecules that are hard and easy to synthesize. The FSscore showcases how a human-in-the-loop framework can be utilized to optimize the assessment of synthetic feasibility for various chemical applications.

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来源期刊
CiteScore
7.30
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0.00%
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Cover Picture: Video Documented Upscaled Synthesis of Salts of the Parent Carbaborate Ion [CB11H12]−, its Undecafluorinated Form [CHB11F11]− and Useful Starting Materials for its Introduction (Chem. Methods 11/2024) Video Documented Upscaled Synthesis of Salts of the Parent Carbaborate Ion [CB11H12]−, its Undecafluorinated Form [CHB11F11]− and Useful Starting Materials for its Introduction High-Pressure Cell for In Situ Grazing Incidence XAS Characterization of Model Catalysts on Planar Supports FSscore: A Personalized Machine Learning-Based Synthetic Feasibility Score Cover Feature: (Chem. Methods 10/2024)
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