整合转录组学和蛋白质组学,了解 2 型糖尿病发病机制的分子机制。

IF 3.4 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Genomics Pub Date : 2024-11-01 DOI:10.1016/j.ygeno.2024.110964
Shuyao Wei , Feifei Ma , Shanshan Feng , Xiaoqin Ha
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引用次数: 0

摘要

肝脏在葡萄糖调节中起着重要作用,其功能障碍与 2 型糖尿病(T2DM)的发生密切相关,肝细胞的胰岛素抵抗(IR)介导糖尿病的发病机制。我们利用 RNA 测序转录组学(RNA-seq)和相对绝对定量异位标签蛋白质组学(iTRAQ)研究了 T2DM 大鼠及其相关对照组在转录和翻译水平上的各种基因表达,以揭示 2 型糖尿病诊断和治疗的潜在候选基因。我们发现卵磷脂视黄醇酰基转移酶(Lrat)基因调控T2DM的肝细胞IR。此外,大鼠肝细胞 BRL-3A 细胞在体外研究中可作为红外模型。因此,我们在 BRL-3A 细胞中过表达 Lrat 基因,通过测量细胞葡萄糖消耗、TCHO 和 LDL-C 水平来探讨 Lrat 基因在 IR 中的作用。最后,我们发现 Lrat 基因可以改善 BRL-3A 细胞的糖脂代谢水平,降低 BRL-3A 细胞的 IR 程度。因此,进一步探索Lrat基因相关的分子机制是有意义的。
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Integrating transcriptomics and proteomics to understand the molecular mechanisms underlying the pathogenesis of type 2 diabetes mellitus
The liver plays an important role in glucose regulation, and their dysfunction is closely associated with the development of type 2 diabetes mellitus (T2DM), and insulin resistance (IR) in hepatocyte mediate the pathogenesis of diabetes mellitus. In T2DM rats and their correlated control, we investigated various genes expression at transcriptional and translational level by utilizing transcriptomic using RNA sequencing (RNA-seq) and proteomics using isobaric tags for relative and absolute quantification (iTRAQ) to disclose potential candidates for Type 2 diabetes diagnosis and therapy. We found the lecithin retinol acyltransferase (Lrat) gene regulate hepatocyte IR in T2DM. Furthermore, BRL-3A cells, rat liver cells, worked as the IR model in vitro study. Hence, Lrat gene was overexpressed in BRL-3A cells to explore the role of Lrat gene in IR by measuring the cellular glucose consumption, TCHO, and LDL-C levels. Finally, we found that Lrat gene can improve the level of glycolipid metabolism in BRL-3A cells and reduce the degree of IR in BRL-3A cells. Therefore, further exploration of Lrat gene related molecular mechanism is meaningful.
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来源期刊
Genomics
Genomics 生物-生物工程与应用微生物
CiteScore
9.60
自引率
2.30%
发文量
260
审稿时长
60 days
期刊介绍: Genomics is a forum for describing the development of genome-scale technologies and their application to all areas of biological investigation. As a journal that has evolved with the field that carries its name, Genomics focuses on the development and application of cutting-edge methods, addressing fundamental questions with potential interest to a wide audience. Our aim is to publish the highest quality research and to provide authors with rapid, fair and accurate review and publication of manuscripts falling within our scope.
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