Marcus Wagner, Julia Sommerer, Franziska G Rauscher
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For each participant, within a randomly selected OCT scan and a randomly selected column therein, manual grading was performed for 26 retinal feature positions. At every position, a total of 3792 descriptors were computed, based on nonlinear transformations of OCT data, first-order neighbourhood statistics and Haralick features. Equivalence and differences between cases and controls were tested for each descriptor at every graded position. Results of multiple testing were expressed in terms of false and true discovery rates controlled by the Benjamini-Yekutieli procedure.</p><p><strong>Results: </strong>In terms of the amount and disparity of true discoveries, overall non-equivalence was found for early AMD and healthy groups. Strong difference signals were observed at the internal limiting membrane and two central retinal positions, particularly for descriptors emphasising speckle noise.</p><p><strong>Conclusions: </strong>Between the retinae of healthy controls and early AMD patients, significant differences were observed at the level of local neighbourhood statistics within OCT data. Thus, independent evidence was obtained for AMD affecting not only the outer retinal layers but the retina as a whole, even in the early stages of the disease. Within OCT data, both cartoon and speckle bear essential parts of the total information. We pursued a constructive, completely documented, traceable and repeatable approach without invoking artificial intelligence methods.</p>","PeriodicalId":19522,"journal":{"name":"Ophthalmic and Physiological Optics","volume":" ","pages":""},"PeriodicalIF":2.8000,"publicationDate":"2024-11-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Extracting full information from OCT scans-signs of early age-related macular degeneration within inner retinal layers by local neighbourhood statistics. 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引用次数: 0
摘要
背景和目的:有报道称,早期老年黄斑变性(AMD)的发生与视网膜层厚度的改变有关,其依据是对光学相干断层扫描(OCT)数据进行经典处理,去除噪声,然后进行图像分割。然而,OCT 数据本身的斑点噪声占总信息量的很大一部分。出于这个原因,我们设计了一种全方位利用光学相干断层扫描数据的方法,该方法能够从整体上识别视网膜上的早期 AMD 征兆:方法:我们设计了一项巢式病例对照研究,其中包括 200 名早期 AMD 病例和 200 名健康对照者。在随机选择的 OCT 扫描和其中随机选择的一列中,对每位参与者的 26 个视网膜特征位置进行人工分级。根据 OCT 数据的非线性变换、一阶邻域统计和 Haralick 特征,在每个位置上共计算出 3792 个描述符。对病例和对照组在每个分级位置的每个描述符进行了等效和差异测试。多重测试的结果以本杰明尼-耶库泰利程序控制的误发现率和真发现率表示:结果:就真实发现的数量和差异而言,早期 AMD 组和健康组总体上不相等。在视网膜内缘膜和两个视网膜中心位置观察到强烈的差异信号,特别是强调斑点噪声的描述符:结论:健康对照组和早期 AMD 患者的视网膜在 OCT 数据的局部邻域统计水平上存在显著差异。因此,有独立证据表明,即使在疾病的早期阶段,AMD 不仅影响视网膜外层,而且影响整个视网膜。在 OCT 数据中,卡通和斑点都是总信息的重要组成部分。我们采用了一种建设性的、完全记录在案的、可追溯的和可重复的方法,而没有使用人工智能方法。
Extracting full information from OCT scans-signs of early age-related macular degeneration within inner retinal layers by local neighbourhood statistics. Part II: Results.
Background and objectives: Associations between the occurrence of early age related macular degeneration (AMD) and alterations in retinal layer thicknesses have been reported, based on classical processing of optical coherence tomography (OCT) data by noise removal and subsequent image segmentation. However, speckle noise within OCT data itself bears a substantial part of the total information. For this reason, we designed an omics-type approach for full exploitation of OCT data, which was able to identify signs of early AMD throughout the retina as a whole.
Methods: A nested case-control study was designed with 200 early AMD cases and 200 healthy controls. For each participant, within a randomly selected OCT scan and a randomly selected column therein, manual grading was performed for 26 retinal feature positions. At every position, a total of 3792 descriptors were computed, based on nonlinear transformations of OCT data, first-order neighbourhood statistics and Haralick features. Equivalence and differences between cases and controls were tested for each descriptor at every graded position. Results of multiple testing were expressed in terms of false and true discovery rates controlled by the Benjamini-Yekutieli procedure.
Results: In terms of the amount and disparity of true discoveries, overall non-equivalence was found for early AMD and healthy groups. Strong difference signals were observed at the internal limiting membrane and two central retinal positions, particularly for descriptors emphasising speckle noise.
Conclusions: Between the retinae of healthy controls and early AMD patients, significant differences were observed at the level of local neighbourhood statistics within OCT data. Thus, independent evidence was obtained for AMD affecting not only the outer retinal layers but the retina as a whole, even in the early stages of the disease. Within OCT data, both cartoon and speckle bear essential parts of the total information. We pursued a constructive, completely documented, traceable and repeatable approach without invoking artificial intelligence methods.
期刊介绍:
Ophthalmic & Physiological Optics, first published in 1925, is a leading international interdisciplinary journal that addresses basic and applied questions pertinent to contemporary research in vision science and optometry.
OPO publishes original research papers, technical notes, reviews and letters and will interest researchers, educators and clinicians concerned with the development, use and restoration of vision.