了解鲸目动物嗅觉进化的比较基因组学方法。

IF 2.1 3区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Molecular Evolution Pub Date : 2024-11-25 DOI:10.1007/s00239-024-10217-5
April A Jauhal, Rochelle Constantine, Richard D Newcomb
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引用次数: 0

摘要

重大的进化转变,如鲸类从陆地生活向海洋生活的转变,会给感官系统带来压力,使其必须适应一系列新的相关刺激。人们对气味在须鲸(mysticetes)进化过程中的作用知之甚少。它们的有齿近亲--齿鲸--缺乏嗅觉的解剖特征,而须鲸是否保留了这种感觉,以及如果保留了这种感觉,鲸类进化过程中嗅觉的压力是何时分化的,目前还不太清楚。我们研究了编码嗅觉信号转导通路元件和关键伴侣蛋白的八个基因,以寻找失活突变和选择性压力的迹象。我们检测的所有基因在所研究的所有八个mysticete基因组中都完好无损,尽管多个基因在odontocete同源物中发生了失活突变。我们还测试了代表鲸目动物嗅觉进化史各种假说的几个模型。我们的研究结果支持这样一种模式,即从干鲸类中分离出来之后,齿鲸的嗅觉能力特别减弱,这有助于澄清鲸目动物嗅觉的进化史。
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A Comparative Genomics Approach to Understanding the Evolution of Olfaction in Cetaceans.

Major evolutionary transitions, such as the shift of cetaceans from terrestrial to marine life, can put pressure on sensory systems to adapt to a new set of relevant stimuli. Relatively little is known about the role of smell in the evolution of mysticetes (baleen whales). While their toothed cousins, the odontocetes, lack the anatomical features to smell, it is less clear whether baleen whales have retained this sense, and if so, when the pressure on olfaction diverged in the cetacean evolutionary lineage. We examined eight genes encoding olfactory signal transduction pathway components and key chaperones for signs of inactivating mutations and selective pressures. All of the genes we examined were intact in all eight mysticete genomes examined, despite inactivating mutations in odontocete homologs in multiple genes. We also tested several models representing various hypotheses regarding the evolutionary history of olfaction in cetaceans. Our results support a model where olfactory ability is specifically reduced in the odontocete lineage following their split from stem cetaceans and serve to clarify the evolutionary history of olfaction in cetaceans.

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来源期刊
Journal of Molecular Evolution
Journal of Molecular Evolution 生物-进化生物学
CiteScore
5.50
自引率
2.60%
发文量
36
审稿时长
3 months
期刊介绍: Journal of Molecular Evolution covers experimental, computational, and theoretical work aimed at deciphering features of molecular evolution and the processes bearing on these features, from the initial formation of macromolecular systems through their evolution at the molecular level, the co-evolution of their functions in cellular and organismal systems, and their influence on organismal adaptation, speciation, and ecology. Topics addressed include the evolution of informational macromolecules and their relation to more complex levels of biological organization, including populations and taxa, as well as the molecular basis for the evolution of ecological interactions of species and the use of molecular data to infer fundamental processes in evolutionary ecology. This coverage accommodates such subfields as new genome sequences, comparative structural and functional genomics, population genetics, the molecular evolution of development, the evolution of gene regulation and gene interaction networks, and in vitro evolution of DNA and RNA, molecular evolutionary ecology, and the development of methods and theory that enable molecular evolutionary inference, including but not limited to, phylogenetic methods.
期刊最新文献
Survey for Activating Oncogenic Mutation Variants in Metazoan Germline Genes. A Comparative Genomics Approach to Understanding the Evolution of Olfaction in Cetaceans. Stochastic Epigenetic Modification and Evolution of Sex Determination in Vertebrates. Cryptic Diversity in Scorpaenodes xyris (Jordan & Gilbert 1882) (Scorpaeniformes: Scorpaenidae) Throughout the Tropical Eastern Pacific. Models of Fluctuating Selection Between Generations: A Solution for the Theoretical Inconsistency.
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