Irina Shilenok, Ksenia Kobzeva, Vladislav Soldatov, Alexey Deykin, Olga Bushueva
{"title":"C11orf58 (Hero20) 基因多态性:对缺血性中风风险的贡献以及与其他耐热隐性伴侣的相互作用。","authors":"Irina Shilenok, Ksenia Kobzeva, Vladislav Soldatov, Alexey Deykin, Olga Bushueva","doi":"10.3390/biomedicines12112603","DOIUrl":null,"url":null,"abstract":"<p><p><b>Background</b>: Recently identified Hero proteins, which possess chaperone-like functions, are promising candidates for research into atherosclerosis-related diseases, including ischemic stroke (IS). <b>Methods</b>: 2204 Russian subjects (917 IS patients and 1287 controls) were genotyped for fifteen common SNPs in Hero20 gene <i>C11orf58</i> using probe-based PCR and the MassArray-4 system. <b>Results</b>: Six <i>C11orf58</i> SNPs were significantly associated with an increased risk of IS in the overall group (OG) and significantly modified by smoking (SMK) and low fruit/vegetable intake (LFVI): rs10766342 (effect allele (EA) A; P(<sub>OG</sub> = 0.02; <sub>SMK</sub> = 0.009; <sub>LFVI</sub> = 0.04)), rs11024032 (EA T; P(<sub>OG</sub> = 0.01; <sub>SMK</sub> = 0.01; <sub>LFVI</sub> = 0.036)), rs11826990 (EA G; P(<sub>OG</sub> = 0.007; <sub>SMK</sub> = 0.004; <sub>LFVI</sub> = 0.03)), rs3203295 (EA C; P(<sub>OG</sub> = 0.016; <sub>SMK</sub> = 0.01; <sub>LFVI</sub> = 0.04)), rs10832676 (EA G; P(<sub>OG</sub> = 0.006; <sub>SMK</sub> = 0.002; <sub>LFVI</sub> = 0.01)), rs4757429 (EA T; P(<sub>OG</sub> = 0.02; <sub>SMK</sub> = 0.04; <sub>LFVI</sub> = 0.04)). The top ten intergenic interactions of Hero genes (two-, three-, and four-locus models) involved exclusively polymorphic loci of <i>C11orf58</i> and <i>C19orf53</i> and were characterized by synergic and additive (independent) effects between SNPs. <b>Conclusions</b>: Thus, <i>C11orf58</i> gene polymorphism represents a major risk factor for IS. Bioinformatic analysis showed the involvement of <i>C11orf58</i> SNPs in molecular mechanisms of IS mediated by their role in the regulation of redox homeostasis, inflammation, vascular remodeling, apoptosis, vasculogenesis, neurogenesis, lipid metabolism, proteostasis, hypoxia, cell signaling, and stress response. In terms of intergenic interactions, <i>C11orf58</i> interacts most closely with <i>C19orf53</i>.</p>","PeriodicalId":8937,"journal":{"name":"Biomedicines","volume":"12 11","pages":""},"PeriodicalIF":3.9000,"publicationDate":"2024-11-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11592265/pdf/","citationCount":"0","resultStr":"{\"title\":\"<i>C11orf58</i> (Hero20) Gene Polymorphism: Contribution to Ischemic Stroke Risk and Interactions with Other Heat-Resistant Obscure Chaperones.\",\"authors\":\"Irina Shilenok, Ksenia Kobzeva, Vladislav Soldatov, Alexey Deykin, Olga Bushueva\",\"doi\":\"10.3390/biomedicines12112603\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><b>Background</b>: Recently identified Hero proteins, which possess chaperone-like functions, are promising candidates for research into atherosclerosis-related diseases, including ischemic stroke (IS). <b>Methods</b>: 2204 Russian subjects (917 IS patients and 1287 controls) were genotyped for fifteen common SNPs in Hero20 gene <i>C11orf58</i> using probe-based PCR and the MassArray-4 system. <b>Results</b>: Six <i>C11orf58</i> SNPs were significantly associated with an increased risk of IS in the overall group (OG) and significantly modified by smoking (SMK) and low fruit/vegetable intake (LFVI): rs10766342 (effect allele (EA) A; P(<sub>OG</sub> = 0.02; <sub>SMK</sub> = 0.009; <sub>LFVI</sub> = 0.04)), rs11024032 (EA T; P(<sub>OG</sub> = 0.01; <sub>SMK</sub> = 0.01; <sub>LFVI</sub> = 0.036)), rs11826990 (EA G; P(<sub>OG</sub> = 0.007; <sub>SMK</sub> = 0.004; <sub>LFVI</sub> = 0.03)), rs3203295 (EA C; P(<sub>OG</sub> = 0.016; <sub>SMK</sub> = 0.01; <sub>LFVI</sub> = 0.04)), rs10832676 (EA G; P(<sub>OG</sub> = 0.006; <sub>SMK</sub> = 0.002; <sub>LFVI</sub> = 0.01)), rs4757429 (EA T; P(<sub>OG</sub> = 0.02; <sub>SMK</sub> = 0.04; <sub>LFVI</sub> = 0.04)). The top ten intergenic interactions of Hero genes (two-, three-, and four-locus models) involved exclusively polymorphic loci of <i>C11orf58</i> and <i>C19orf53</i> and were characterized by synergic and additive (independent) effects between SNPs. <b>Conclusions</b>: Thus, <i>C11orf58</i> gene polymorphism represents a major risk factor for IS. Bioinformatic analysis showed the involvement of <i>C11orf58</i> SNPs in molecular mechanisms of IS mediated by their role in the regulation of redox homeostasis, inflammation, vascular remodeling, apoptosis, vasculogenesis, neurogenesis, lipid metabolism, proteostasis, hypoxia, cell signaling, and stress response. In terms of intergenic interactions, <i>C11orf58</i> interacts most closely with <i>C19orf53</i>.</p>\",\"PeriodicalId\":8937,\"journal\":{\"name\":\"Biomedicines\",\"volume\":\"12 11\",\"pages\":\"\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2024-11-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11592265/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomedicines\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.3390/biomedicines12112603\",\"RegionNum\":3,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedicines","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.3390/biomedicines12112603","RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
C11orf58 (Hero20) Gene Polymorphism: Contribution to Ischemic Stroke Risk and Interactions with Other Heat-Resistant Obscure Chaperones.
Background: Recently identified Hero proteins, which possess chaperone-like functions, are promising candidates for research into atherosclerosis-related diseases, including ischemic stroke (IS). Methods: 2204 Russian subjects (917 IS patients and 1287 controls) were genotyped for fifteen common SNPs in Hero20 gene C11orf58 using probe-based PCR and the MassArray-4 system. Results: Six C11orf58 SNPs were significantly associated with an increased risk of IS in the overall group (OG) and significantly modified by smoking (SMK) and low fruit/vegetable intake (LFVI): rs10766342 (effect allele (EA) A; P(OG = 0.02; SMK = 0.009; LFVI = 0.04)), rs11024032 (EA T; P(OG = 0.01; SMK = 0.01; LFVI = 0.036)), rs11826990 (EA G; P(OG = 0.007; SMK = 0.004; LFVI = 0.03)), rs3203295 (EA C; P(OG = 0.016; SMK = 0.01; LFVI = 0.04)), rs10832676 (EA G; P(OG = 0.006; SMK = 0.002; LFVI = 0.01)), rs4757429 (EA T; P(OG = 0.02; SMK = 0.04; LFVI = 0.04)). The top ten intergenic interactions of Hero genes (two-, three-, and four-locus models) involved exclusively polymorphic loci of C11orf58 and C19orf53 and were characterized by synergic and additive (independent) effects between SNPs. Conclusions: Thus, C11orf58 gene polymorphism represents a major risk factor for IS. Bioinformatic analysis showed the involvement of C11orf58 SNPs in molecular mechanisms of IS mediated by their role in the regulation of redox homeostasis, inflammation, vascular remodeling, apoptosis, vasculogenesis, neurogenesis, lipid metabolism, proteostasis, hypoxia, cell signaling, and stress response. In terms of intergenic interactions, C11orf58 interacts most closely with C19orf53.
BiomedicinesBiochemistry, Genetics and Molecular Biology-General Biochemistry,Genetics and Molecular Biology
CiteScore
5.20
自引率
8.50%
发文量
2823
审稿时长
8 weeks
期刊介绍:
Biomedicines (ISSN 2227-9059; CODEN: BIOMID) is an international, scientific, open access journal on biomedicines published quarterly online by MDPI.