鉴定葡萄果实成熟期的 H3K27 甲基转移酶基因及其表达谱。

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Biology Reports Pub Date : 2024-11-27 DOI:10.1007/s11033-024-10117-3
Ding-Ding Zuo, Hao-Ting Sun, Lu Yang, Fang-Hui-Zi Shang, Da-Long Guo
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引用次数: 0

摘要

背景:H2O2处理可加速葡萄成熟,并介导组蛋白甲基化水平的变化。组蛋白甲基化作为一种表观遗传修饰,参与调控果实成熟相关基因的表达,包括 H3K27ac、H3K4me1、H3K27me3 和 H3K4me3。其中,H3K27me3 甲基化在果实发育过程中一般受到负调控,而 H3K27 甲基转移酶可通过调控 H3K27me3 的水平参与果实的发育过程。葡萄中的H3K27甲基转移酶成员尚未明确,更好地了解它们的功能有助于调控果实的发育:通过分析葡萄基因组的保守结构域,发现了三种 H3K27 甲基转移酶,并分别命名为 VvH3K27-1、VvH3K27-2 和 VvH3K27-3。进一步的分析包括它们的保守结构域、基因结构、系统发育关系、蛋白质理化性质、染色体定位、亚细胞定位以及启动子区域的顺式作用元件。值得注意的是,所有 H3K27 甲基转移酶基因都有一个高度保守的 SET 结构域。VvH3K27-2 定位于细胞核中,H2O2 处理会导致这些基因的表达量减少:结论:在葡萄中发现了三个 H3K27 甲基转移酶基因,这些基因在浆果发育过程中下调,H2O2 处理会抑制它们的表达。因此,H3K27甲基转移酶基因参与了果实发育的调控。
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Identification of grape H3K27 methyltransferase genes and their expression profiles during grape fruit ripening.

Background: H2O2 treatment can accelerate grape ripening and mediate changes in histone methylation levels. Histone methylation, as an epigenetic modification, is involved in regulating the expression of genes related to fruit ripening, including H3K27ac, H3K4me1, H3K27me3 and H3K4me3. Among them, H3K27me3 methylation is generally negatively regulated in development, and H3K27 methyltransferase can participate in the development process of fruit by regulate the level of H3K27me3. The H3K27 methyltransferase members in grapes are not yet clear, and a better understanding of their functions contributes to regulating fruit development.

Methods and results: By analyzing the conserved domains of the grape genome, three H3K27 methyltransferases were identified and named as VvH3K27-1, VvH3K27-2 and VvH3K27-3, respectively. Further analysis included their conserved domains, gene structure, phylogenetic relationship, protein physicochemical properties, chromosome localization, subcellular localization, and cis-acting elements in the promoter region. It is worth noting that all H3K27 methyltransferase genes have a highly conserved SET domain. VvH3K27-2 was localized in the nucleus and H2O2 treatment resulted in a decrease in the expression of these genes.

Conclusion: Three H3K27 methyltransferase genes were identified in grape, which are down-regulated during berry development, and their expression is inhibited by H2O2 treatment. Thus, H3K27 methyltransferase genes are involved in the regulation of fruit development.

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来源期刊
Molecular Biology Reports
Molecular Biology Reports 生物-生化与分子生物学
CiteScore
5.00
自引率
0.00%
发文量
1048
审稿时长
5.6 months
期刊介绍: Molecular Biology Reports publishes original research papers and review articles that demonstrate novel molecular and cellular findings in both eukaryotes (animals, plants, algae, funghi) and prokaryotes (bacteria and archaea).The journal publishes results of both fundamental and translational research as well as new techniques that advance experimental progress in the field and presents original research papers, short communications and (mini-) reviews.
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