人类海马蛋白乳酸化的全局分析。

IF 2.1 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS PROTEOMICS – Clinical Applications Pub Date : 2024-11-28 DOI:10.1002/prca.202400061
Chun-Mei Shi, Qiao-Chu Wang, Xiao-Lu Li, Ye-Hong Yang, Xiao-Yue Tang, Yue Wu, Tao Ding, Xu-Tong Zhang, Zhi-Yi Zhang, Ron Han, Jie Kong, Jiang-Feng Liu, Jun-Tao Yang
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引用次数: 0

摘要

目的:海马体长期以来一直与认知和记忆功能有关,最近发现的翻译后修饰(PTM)赖氨酸乳酸化(Kla)在海马体中的作用仍未得到充分研究。实验设计:采用LC-MS/MS自下而上的蛋白质组学方法对3个人体海马组织样本进行分析,绘制正常生理条件下人体海马的乳酸化图谱。结果:我们在853个蛋白中鉴定出2579个可量化的I类乳酸化位点,其中包含四种类型的修饰基元。细胞定位分析表明,大部分乳酸化蛋白分布在细胞质中。功能富集分析表明,乳酸化蛋白主要参与能量代谢途径。此外,我们发现组蛋白的乳酸化在不同组织中表现出一定程度的保守性。与先前报道的乳酸化数据库相比,本研究首次鉴定出213种乳酸化蛋白。结论及临床意义:本研究首次报道了人类海马整体乳酸化蛋白图谱。本研究为进一步研究生理条件下海马乳酸酰化提供了可靠的基础。
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Global Profiling of Protein Lactylation in Human Hippocampi.

Purpose: The hippocampus has long been associated with cognition and memory function, the implications of lysine lactylation (Kla), a recently identified post-translational modification (PTM), in the role of the hippocampus remain largely unexplored.

Experimental design: An LC-MS/MS bottom-up proteomics analysis of three human hippocampal tissue samples was applied to profile the lactylation map in human hippocampi under normal physiological conditions.

Results: We identified 2579 quantifiable Class I lactylated sites in 853 proteins, of which contained four types of modification motifs. Cellular localization analysis implies that a majority of lactylated proteins were distributed in the cytoplasm. Functional enrichment analysis showed that lactylated proteins were mainly involved in energy metabolic pathways. In addition, we found that the lactylation on histones exhibits a certain degree of conservation across different tissues. Compared with previously reported lactylation databases, 213 lactylated proteins were identified for the first time in this study.

Conclusion and clinical relevance: The first global lactylated proteins atlas of human hippocampi was reported in this study. Our work provides a reliable foundation for further research on lactylation in the hippocampus under physiological conditions.

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来源期刊
PROTEOMICS – Clinical Applications
PROTEOMICS – Clinical Applications 医学-生化研究方法
CiteScore
5.20
自引率
5.00%
发文量
50
审稿时长
1 months
期刊介绍: PROTEOMICS - Clinical Applications has developed into a key source of information in the field of applying proteomics to the study of human disease and translation to the clinic. With 12 issues per year, the journal will publish papers in all relevant areas including: -basic proteomic research designed to further understand the molecular mechanisms underlying dysfunction in human disease -the results of proteomic studies dedicated to the discovery and validation of diagnostic and prognostic disease biomarkers -the use of proteomics for the discovery of novel drug targets -the application of proteomics in the drug development pipeline -the use of proteomics as a component of clinical trials.
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