用极化法变性曲线反褶积法定量胶原碎片和明胶

Richard A. Condell , Naomi Sakai , Ruth T. Mercado , Ed Larenas
{"title":"用极化法变性曲线反褶积法定量胶原碎片和明胶","authors":"Richard A. Condell ,&nbsp;Naomi Sakai ,&nbsp;Ruth T. Mercado ,&nbsp;Ed Larenas","doi":"10.1016/S0174-173X(88)80014-1","DOIUrl":null,"url":null,"abstract":"<div><p>A method for quantitating nicked or shortened molecules (fragments) in pepsinizedbovine type I collagen preparations using polarimetry thermal denaturation curves is described.^The shortened molcules denature about 4°C lower than intact collagen molecules. The analog output of a polarimeter was digitized and stored on a microcomputer disk. A BASIC program was written which retrieves the specific rotation data from the disk, smooths the data with a boxcar average, and plots the derivative of the denaturation curve. The derivative curve was deconvoluted by fitting three Gaussian curves to the derivative curve using published algorithms. The area of the Gaussian centered at 37°C was proportional to the amount of collagen fragments. A good correlation between the amount of fragments determined by polarimetry and by a trypsin sensitivity assay was observed. The overall precision of the method was about 10% RSD, and the method was repeatable by multiple analysts. Application of the method to reconstituted fibrillar collagen samples showed that more fragments are generated when pepsin digestion time is lengthened. By fitting a fourth Gaussian component to the derivative curve, the method can also be used to determine relative amounts of denatured collagen (helix partially unwound but a chains not nicked). The detection limit for denatured collagen is about 20%.</p></div>","PeriodicalId":77694,"journal":{"name":"Collagen and related research","volume":"8 5","pages":"Pages 407-418"},"PeriodicalIF":0.0000,"publicationDate":"1988-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/S0174-173X(88)80014-1","citationCount":"10","resultStr":"{\"title\":\"Quantitation of Collagen Fragments and Gelatin by Deconvolution of Polarimetry Denaturation Curves\",\"authors\":\"Richard A. Condell ,&nbsp;Naomi Sakai ,&nbsp;Ruth T. Mercado ,&nbsp;Ed Larenas\",\"doi\":\"10.1016/S0174-173X(88)80014-1\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>A method for quantitating nicked or shortened molecules (fragments) in pepsinizedbovine type I collagen preparations using polarimetry thermal denaturation curves is described.^The shortened molcules denature about 4°C lower than intact collagen molecules. The analog output of a polarimeter was digitized and stored on a microcomputer disk. A BASIC program was written which retrieves the specific rotation data from the disk, smooths the data with a boxcar average, and plots the derivative of the denaturation curve. The derivative curve was deconvoluted by fitting three Gaussian curves to the derivative curve using published algorithms. The area of the Gaussian centered at 37°C was proportional to the amount of collagen fragments. A good correlation between the amount of fragments determined by polarimetry and by a trypsin sensitivity assay was observed. The overall precision of the method was about 10% RSD, and the method was repeatable by multiple analysts. Application of the method to reconstituted fibrillar collagen samples showed that more fragments are generated when pepsin digestion time is lengthened. By fitting a fourth Gaussian component to the derivative curve, the method can also be used to determine relative amounts of denatured collagen (helix partially unwound but a chains not nicked). The detection limit for denatured collagen is about 20%.</p></div>\",\"PeriodicalId\":77694,\"journal\":{\"name\":\"Collagen and related research\",\"volume\":\"8 5\",\"pages\":\"Pages 407-418\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1988-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/S0174-173X(88)80014-1\",\"citationCount\":\"10\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Collagen and related research\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0174173X88800141\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Collagen and related research","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0174173X88800141","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 10

摘要

描述了一种使用极化热变性曲线定量测定胃蛋白酶化牛I型胶原制剂中缺口或缩短分子(片段)的方法。^缩短的胶原蛋白分子变性比完整的胶原蛋白分子低约4℃。偏光计的模拟输出被数字化并存储在微机磁盘上。编写了一个BASIC程序,从磁盘中检索特定的旋转数据,用箱车平均值对数据进行平滑处理,并绘制变性曲线的导数。利用已发表的算法将三条高斯曲线拟合到导数曲线上,对导数曲线进行反卷积。在37°C处以高斯为中心的面积与胶原碎片的数量成正比。观察到极化法和胰蛋白酶敏感性测定法测定的片段数量之间有良好的相关性。该方法的总体精密度约为10% RSD,该方法可被多个分析人员重复使用。将该方法应用于重建的原纤维胶原样品中,结果表明,随着胃蛋白酶消化时间的延长,产生的片段增多。通过将第四高斯分量拟合到导数曲线上,该方法还可用于确定变性胶原蛋白的相对数量(螺旋部分解开,但链没有缺口)。变性胶原蛋白的检出限约为20%。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Quantitation of Collagen Fragments and Gelatin by Deconvolution of Polarimetry Denaturation Curves

A method for quantitating nicked or shortened molecules (fragments) in pepsinizedbovine type I collagen preparations using polarimetry thermal denaturation curves is described.^The shortened molcules denature about 4°C lower than intact collagen molecules. The analog output of a polarimeter was digitized and stored on a microcomputer disk. A BASIC program was written which retrieves the specific rotation data from the disk, smooths the data with a boxcar average, and plots the derivative of the denaturation curve. The derivative curve was deconvoluted by fitting three Gaussian curves to the derivative curve using published algorithms. The area of the Gaussian centered at 37°C was proportional to the amount of collagen fragments. A good correlation between the amount of fragments determined by polarimetry and by a trypsin sensitivity assay was observed. The overall precision of the method was about 10% RSD, and the method was repeatable by multiple analysts. Application of the method to reconstituted fibrillar collagen samples showed that more fragments are generated when pepsin digestion time is lengthened. By fitting a fourth Gaussian component to the derivative curve, the method can also be used to determine relative amounts of denatured collagen (helix partially unwound but a chains not nicked). The detection limit for denatured collagen is about 20%.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Increased Collagenase Activity is not Detectable in Cervical Softening in the Ewe Abstracts From The Second International Conference On Molecular Biology And Pathology Of Matrix' Philadelphia, Pennsylvania, June 15-18,1988 Authors Index The Drosophila Homoeotic Gene Spalt is Structurally Related to Collagen αl(IV) Chain Quantitation of Collagen Fragments and Gelatin by Deconvolution of Polarimetry Denaturation Curves
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1