J Dörenberg, C J Schmidt, T Berlage, R Knüchel-Clarke
{"title":"[德国ICCR数据集的建立:以turb为例的SNOMED CT的翻译和整合]。","authors":"J Dörenberg, C J Schmidt, T Berlage, R Knüchel-Clarke","doi":"10.1007/s00292-024-01398-3","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>The structured recording of data from histopathological findings and their interoperability is critical for quality assurance in pathology.</p><p><strong>Materials and methods: </strong>To harmonize the content of the reports, the International Collaboration on Cancer Reporting (ICCR) has defined standardized datasets. These datasets are not yet available in German nationwide. This gap is addressed here using the transurethral bladder resection (TUR-B) dataset as a use case.</p><p><strong>Results: </strong>We describe the process of establishing the datasets by carrying out translation, mapping on SNOMED CT codes, and using SNOMED CTs hierarchy to fill dropdown menus. Furthermore, we identified rules for checking for self-consistency of reports by using the example of the TUR bladder.</p><p><strong>Discussion: </strong>With this article, we have created an example of a German version of the ICCR TUR‑B dataset including mapping to the SNOMED CT terminology. Further activities should include the definition of overarching cancer disease models to further exploit the potential of SNOMED CT.</p>","PeriodicalId":74402,"journal":{"name":"Pathologie (Heidelberg, Germany)","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"[Establishment of a German ICCR dataset : Translation and integration of SNOMED CT using the example of TUR-B].\",\"authors\":\"J Dörenberg, C J Schmidt, T Berlage, R Knüchel-Clarke\",\"doi\":\"10.1007/s00292-024-01398-3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>The structured recording of data from histopathological findings and their interoperability is critical for quality assurance in pathology.</p><p><strong>Materials and methods: </strong>To harmonize the content of the reports, the International Collaboration on Cancer Reporting (ICCR) has defined standardized datasets. These datasets are not yet available in German nationwide. This gap is addressed here using the transurethral bladder resection (TUR-B) dataset as a use case.</p><p><strong>Results: </strong>We describe the process of establishing the datasets by carrying out translation, mapping on SNOMED CT codes, and using SNOMED CTs hierarchy to fill dropdown menus. Furthermore, we identified rules for checking for self-consistency of reports by using the example of the TUR bladder.</p><p><strong>Discussion: </strong>With this article, we have created an example of a German version of the ICCR TUR‑B dataset including mapping to the SNOMED CT terminology. Further activities should include the definition of overarching cancer disease models to further exploit the potential of SNOMED CT.</p>\",\"PeriodicalId\":74402,\"journal\":{\"name\":\"Pathologie (Heidelberg, Germany)\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-12-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Pathologie (Heidelberg, Germany)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/s00292-024-01398-3\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Pathologie (Heidelberg, Germany)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/s00292-024-01398-3","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
背景:组织病理学发现数据的结构化记录及其互操作性对病理学质量保证至关重要。材料和方法:为了协调报告的内容,国际癌症报告合作组织(ICCR)定义了标准化的数据集。这些数据集尚未在德国全国范围内提供。本文使用经尿道膀胱切除术(turb)数据集作为用例来解决这一差距。结果:我们描述了通过对SNOMED CT代码进行翻译、映射和使用SNOMED CT分层填充下拉菜单来建立数据集的过程。此外,我们通过使用TUR膀胱的例子确定了检查报告自一致性的规则。讨论:在本文中,我们创建了一个德语版本的ICCR TUR - B数据集示例,包括到SNOMED CT术语的映射。进一步的活动应包括确定总体癌症疾病模型,以进一步开发SNOMED CT的潜力。
[Establishment of a German ICCR dataset : Translation and integration of SNOMED CT using the example of TUR-B].
Background: The structured recording of data from histopathological findings and their interoperability is critical for quality assurance in pathology.
Materials and methods: To harmonize the content of the reports, the International Collaboration on Cancer Reporting (ICCR) has defined standardized datasets. These datasets are not yet available in German nationwide. This gap is addressed here using the transurethral bladder resection (TUR-B) dataset as a use case.
Results: We describe the process of establishing the datasets by carrying out translation, mapping on SNOMED CT codes, and using SNOMED CTs hierarchy to fill dropdown menus. Furthermore, we identified rules for checking for self-consistency of reports by using the example of the TUR bladder.
Discussion: With this article, we have created an example of a German version of the ICCR TUR‑B dataset including mapping to the SNOMED CT terminology. Further activities should include the definition of overarching cancer disease models to further exploit the potential of SNOMED CT.