Ze Tang, Shiyun Feng, Qing Liu, Yunze Ban, Yan Zhang
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High-dimensional pathological features were extracted from digital pathological sections using CellProfiler software. The selected features were used to develop a predictive model based on decision trees and generalized linear regression, and the model was validated in an independent cohort. Clinically significant pathological factors (P < 0.05) were included in multivariate logistic regression for further validation. The model's performance was assessed using calibration curves and receiver operating characteristic (ROC) curves, generated with the Bootstrap method. Decision curve analysis (DCA) was employed to evaluate the clinical utility of the predictive model.</p><p><strong>Results: </strong>A total of 229 patients (12.89%) were diagnosed with PSM. Logistic regression analysis identified multifocal lesions, vascular invasion, and pathomics-based features as independent predictors of PSM. The predictive model, represented by a decision tree, demonstrated good discrimination with an area under the ROC curve of 0.899 (95% CI: 0.842-0.956, P < 0.001), and a strong calibration curve between the predicted probability and the actual probability. Additionally, the nomogram demonstrated slightly inferior discrimination with an area under the ROC curve of 0.803 (95% CI: 0.734-0.872, P < 0.001) in the training cohort.</p><p><strong>Conclusion: </strong>Our study successfully established and validated a pathology-based predictive model for PSM risk, which could enhance preoperative evaluation and inform treatment strategies for ESCC.</p>","PeriodicalId":14131,"journal":{"name":"International Journal of General Medicine","volume":"17 ","pages":"5869-5882"},"PeriodicalIF":2.0000,"publicationDate":"2024-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11629666/pdf/","citationCount":"0","resultStr":"{\"title\":\"Using Pathomics-Based Model for Predicting Positive Surgical Margins in Patients with Esophageal Squamous Cell Carcinoma: A Comparative Study of Decision Tree and Nomogram.\",\"authors\":\"Ze Tang, Shiyun Feng, Qing Liu, Yunze Ban, Yan Zhang\",\"doi\":\"10.2147/IJGM.S495296\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Objective: </strong>Esophageal squamous cell carcinoma (ESCC) has a high incidence and mortality rate. 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Clinically significant pathological factors (P < 0.05) were included in multivariate logistic regression for further validation. The model's performance was assessed using calibration curves and receiver operating characteristic (ROC) curves, generated with the Bootstrap method. Decision curve analysis (DCA) was employed to evaluate the clinical utility of the predictive model.</p><p><strong>Results: </strong>A total of 229 patients (12.89%) were diagnosed with PSM. Logistic regression analysis identified multifocal lesions, vascular invasion, and pathomics-based features as independent predictors of PSM. The predictive model, represented by a decision tree, demonstrated good discrimination with an area under the ROC curve of 0.899 (95% CI: 0.842-0.956, P < 0.001), and a strong calibration curve between the predicted probability and the actual probability. 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引用次数: 0
摘要
目的:食管鳞状细胞癌(ESCC)具有较高的发病率和死亡率。术后阳性切缘(PSM)常与预后不良相关。本研究旨在建立并验证ESCC患者PSM阳性的预测模型,以指导术前计划和改善患者预后。方法:对2015年1月至2023年12月在吉林大学第一附属医院行食管癌手术的1776例患者进行回顾性分析。手术边缘可见残余肿瘤(R2)或显微残余肿瘤(R1)的患者被归类为PSM。使用CellProfiler软件从数字病理切片中提取高维病理特征。利用所选择的特征建立基于决策树和广义线性回归的预测模型,并在独立队列中对模型进行验证。将临床显著的病理因素(P < 0.05)纳入多因素logistic回归进一步验证。使用Bootstrap方法生成的校准曲线和受试者工作特征(ROC)曲线来评估模型的性能。采用决策曲线分析(Decision curve analysis, DCA)评价预测模型的临床应用价值。结果:229例患者确诊为PSM,占12.89%。Logistic回归分析确定了多灶性病变、血管侵犯和基于病理的特征是PSM的独立预测因素。以决策树表示的预测模型具有较好的判别性,ROC曲线下面积为0.899 (95% CI: 0.842-0.956, P < 0.001),预测概率与实际概率之间有较强的校准曲线。此外,训练队列的nomogram判别能力略差,ROC曲线下面积为0.803 (95% CI: 0.734-0.872, P < 0.001)。结论:本研究成功建立并验证了一种基于病理的PSM风险预测模型,可加强ESCC术前评估和指导治疗策略。
Using Pathomics-Based Model for Predicting Positive Surgical Margins in Patients with Esophageal Squamous Cell Carcinoma: A Comparative Study of Decision Tree and Nomogram.
Objective: Esophageal squamous cell carcinoma (ESCC) has a high incidence and mortality rate. Postoperative positive surgical margins (PSM) often correlate with poor prognosis. This study aims to develop and validate a predictive model for PSM positivity in ESCC patients, with the potential to guide preoperative planning and improve patient outcomes.
Methods: We conducted a retrospective analysis of 1776 patients who underwent esophageal cancer surgery at the First Affiliated Hospital of Jilin University between January 2015 and December 2023. Patients with visible residual tumors (R2) or microscopic residual tumors (R1) at the surgical margins were classified as having PSM. High-dimensional pathological features were extracted from digital pathological sections using CellProfiler software. The selected features were used to develop a predictive model based on decision trees and generalized linear regression, and the model was validated in an independent cohort. Clinically significant pathological factors (P < 0.05) were included in multivariate logistic regression for further validation. The model's performance was assessed using calibration curves and receiver operating characteristic (ROC) curves, generated with the Bootstrap method. Decision curve analysis (DCA) was employed to evaluate the clinical utility of the predictive model.
Results: A total of 229 patients (12.89%) were diagnosed with PSM. Logistic regression analysis identified multifocal lesions, vascular invasion, and pathomics-based features as independent predictors of PSM. The predictive model, represented by a decision tree, demonstrated good discrimination with an area under the ROC curve of 0.899 (95% CI: 0.842-0.956, P < 0.001), and a strong calibration curve between the predicted probability and the actual probability. Additionally, the nomogram demonstrated slightly inferior discrimination with an area under the ROC curve of 0.803 (95% CI: 0.734-0.872, P < 0.001) in the training cohort.
Conclusion: Our study successfully established and validated a pathology-based predictive model for PSM risk, which could enhance preoperative evaluation and inform treatment strategies for ESCC.
期刊介绍:
The International Journal of General Medicine is an international, peer-reviewed, open access journal that focuses on general and internal medicine, pathogenesis, epidemiology, diagnosis, monitoring and treatment protocols. The journal is characterized by the rapid reporting of reviews, original research and clinical studies across all disease areas.
A key focus of the journal is the elucidation of disease processes and management protocols resulting in improved outcomes for the patient. Patient perspectives such as satisfaction, quality of life, health literacy and communication and their role in developing new healthcare programs and optimizing clinical outcomes are major areas of interest for the journal.
As of 1st April 2019, the International Journal of General Medicine will no longer consider meta-analyses for publication.