{"title":"海参在繁殖和休眠之间的生理变化所依赖的神经内分泌调控网络:转录组分析的启示","authors":"Lifei Ge, Jixiu Wang, Zhijing Jiang, Zhiqing Ye, Ying Wei, Yibo Wang, Yuting Liu, Chenqian Wu, Xiuwen Xu, Jingwen Yang, Lina Sun, Tianming Wang","doi":"10.1016/j.cbd.2024.101393","DOIUrl":null,"url":null,"abstract":"<p><p>The sea cucumber Apostichopus japonicus is an economically significant marine species in China, with numerous studies focusing on its diverse physiological processes, including seasonal reproduction and aestivation. The neuroendocrine system plays a critical role in regulating these physiological transitions. In this study, we utilized transcriptomic techniques and bioinformatics tools to identify key functional genes in the nerve ring of A. japonicus during four distinct physiological phases: pre-reproduction, post-reproduction, aestivation, and recovery from aestivation. Totally 33 neuropeptide precursors and 521 G protein-coupled receptors (GPCRs) were identified. Highlighted key genes, such as AjCRZP, AjPDFP1b, AjSSP1, AjSSP2, and AjSSTR4, were proposed to contribute to transitions of reproduction to aestivation. The temporal trends and functions of differentially expressed genes (DEGs) were validated through qRT-PCR assays. Additionally, we constructed a preliminary neuroendocrine regulatory network, with AjGALR2 and AjCHRM5 identified as central hub genes. These findings offer valuable insights into the neuroendocrine regulation of reproduction and aestivation in A. japonicus, providing a foundation for further mechanistic studies and enhancing our understanding of sea cucumber biology.</p>","PeriodicalId":93949,"journal":{"name":"Comparative biochemistry and physiology. Part D, Genomics & proteomics","volume":"54 ","pages":"101393"},"PeriodicalIF":0.0000,"publicationDate":"2024-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Neuroendocrine regulatory network underlying physiological shifts between reproduction and aestivation of sea cucumber Apostichopus japonicus: Insights from transcriptome analysis.\",\"authors\":\"Lifei Ge, Jixiu Wang, Zhijing Jiang, Zhiqing Ye, Ying Wei, Yibo Wang, Yuting Liu, Chenqian Wu, Xiuwen Xu, Jingwen Yang, Lina Sun, Tianming Wang\",\"doi\":\"10.1016/j.cbd.2024.101393\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The sea cucumber Apostichopus japonicus is an economically significant marine species in China, with numerous studies focusing on its diverse physiological processes, including seasonal reproduction and aestivation. The neuroendocrine system plays a critical role in regulating these physiological transitions. In this study, we utilized transcriptomic techniques and bioinformatics tools to identify key functional genes in the nerve ring of A. japonicus during four distinct physiological phases: pre-reproduction, post-reproduction, aestivation, and recovery from aestivation. Totally 33 neuropeptide precursors and 521 G protein-coupled receptors (GPCRs) were identified. Highlighted key genes, such as AjCRZP, AjPDFP1b, AjSSP1, AjSSP2, and AjSSTR4, were proposed to contribute to transitions of reproduction to aestivation. The temporal trends and functions of differentially expressed genes (DEGs) were validated through qRT-PCR assays. Additionally, we constructed a preliminary neuroendocrine regulatory network, with AjGALR2 and AjCHRM5 identified as central hub genes. These findings offer valuable insights into the neuroendocrine regulation of reproduction and aestivation in A. japonicus, providing a foundation for further mechanistic studies and enhancing our understanding of sea cucumber biology.</p>\",\"PeriodicalId\":93949,\"journal\":{\"name\":\"Comparative biochemistry and physiology. Part D, Genomics & proteomics\",\"volume\":\"54 \",\"pages\":\"101393\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-12-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Comparative biochemistry and physiology. Part D, Genomics & proteomics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1016/j.cbd.2024.101393\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Comparative biochemistry and physiology. Part D, Genomics & proteomics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1016/j.cbd.2024.101393","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Neuroendocrine regulatory network underlying physiological shifts between reproduction and aestivation of sea cucumber Apostichopus japonicus: Insights from transcriptome analysis.
The sea cucumber Apostichopus japonicus is an economically significant marine species in China, with numerous studies focusing on its diverse physiological processes, including seasonal reproduction and aestivation. The neuroendocrine system plays a critical role in regulating these physiological transitions. In this study, we utilized transcriptomic techniques and bioinformatics tools to identify key functional genes in the nerve ring of A. japonicus during four distinct physiological phases: pre-reproduction, post-reproduction, aestivation, and recovery from aestivation. Totally 33 neuropeptide precursors and 521 G protein-coupled receptors (GPCRs) were identified. Highlighted key genes, such as AjCRZP, AjPDFP1b, AjSSP1, AjSSP2, and AjSSTR4, were proposed to contribute to transitions of reproduction to aestivation. The temporal trends and functions of differentially expressed genes (DEGs) were validated through qRT-PCR assays. Additionally, we constructed a preliminary neuroendocrine regulatory network, with AjGALR2 and AjCHRM5 identified as central hub genes. These findings offer valuable insights into the neuroendocrine regulation of reproduction and aestivation in A. japonicus, providing a foundation for further mechanistic studies and enhancing our understanding of sea cucumber biology.