Da-Hye Lee , Hyo Jung Ju , Yoojin Lee , Young-Kyung Bae
{"title":"利用数字PCR技术制备诺如病毒GI和GII的RNA对照物。","authors":"Da-Hye Lee , Hyo Jung Ju , Yoojin Lee , Young-Kyung Bae","doi":"10.1016/j.virol.2024.110358","DOIUrl":null,"url":null,"abstract":"<div><div>Norovirus is a highly virulent pathogen that causes enteritis in all age groups worldwide. Owing to the diversity of noroviruses, the development of vaccines and treatments is challenging, and an early and accurate diagnosis is crucial. Reference materials (RMs) developed previously for norovirus genotypes I (GI) and II (GII) were quantified using reverse transcription quantitative PCR. In this study, we developed norovirus GI and GII RMs as <em>in vitro</em> transcribed RNA forms. These RMs were then assigned reference values for the RNA copy number concentration. The concentrations of GI and GII RMs determined using in-house reverse transcription digital PCR assays were <span><math><mrow><mrow><mo>(</mo><mrow><mn>1.92</mn><mspace></mspace><mo>±</mo><mspace></mspace><mn>0.37</mn></mrow><mo>)</mo></mrow><mo>×</mo><msup><mn>10</mn><mn>7</mn></msup></mrow></math></span> and <span><math><mrow><mrow><mo>(</mo><mrow><mn>1.20</mn><mo>±</mo><mspace></mspace><mn>0.27</mn></mrow><mo>)</mo></mrow><mo>×</mo><msup><mn>10</mn><mn>7</mn></msup></mrow></math></span> copy/mL, respectively. The homogeneity and stability of the RMs were evaluated, and their compatibility with commercial diagnostic kits was validated. These RMs can be used for the development of detection assays, as calibrants for various molecular measurement techniques, and as test materials for internal and external quality assurance.</div></div>","PeriodicalId":23666,"journal":{"name":"Virology","volume":"603 ","pages":"Article 110358"},"PeriodicalIF":2.8000,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Development of RNA reference materials for norovirus GI and GII using digital PCR\",\"authors\":\"Da-Hye Lee , Hyo Jung Ju , Yoojin Lee , Young-Kyung Bae\",\"doi\":\"10.1016/j.virol.2024.110358\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Norovirus is a highly virulent pathogen that causes enteritis in all age groups worldwide. Owing to the diversity of noroviruses, the development of vaccines and treatments is challenging, and an early and accurate diagnosis is crucial. Reference materials (RMs) developed previously for norovirus genotypes I (GI) and II (GII) were quantified using reverse transcription quantitative PCR. In this study, we developed norovirus GI and GII RMs as <em>in vitro</em> transcribed RNA forms. These RMs were then assigned reference values for the RNA copy number concentration. The concentrations of GI and GII RMs determined using in-house reverse transcription digital PCR assays were <span><math><mrow><mrow><mo>(</mo><mrow><mn>1.92</mn><mspace></mspace><mo>±</mo><mspace></mspace><mn>0.37</mn></mrow><mo>)</mo></mrow><mo>×</mo><msup><mn>10</mn><mn>7</mn></msup></mrow></math></span> and <span><math><mrow><mrow><mo>(</mo><mrow><mn>1.20</mn><mo>±</mo><mspace></mspace><mn>0.27</mn></mrow><mo>)</mo></mrow><mo>×</mo><msup><mn>10</mn><mn>7</mn></msup></mrow></math></span> copy/mL, respectively. The homogeneity and stability of the RMs were evaluated, and their compatibility with commercial diagnostic kits was validated. These RMs can be used for the development of detection assays, as calibrants for various molecular measurement techniques, and as test materials for internal and external quality assurance.</div></div>\",\"PeriodicalId\":23666,\"journal\":{\"name\":\"Virology\",\"volume\":\"603 \",\"pages\":\"Article 110358\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2025-02-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Virology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0042682224003829\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"VIROLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Virology","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0042682224003829","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"VIROLOGY","Score":null,"Total":0}
Development of RNA reference materials for norovirus GI and GII using digital PCR
Norovirus is a highly virulent pathogen that causes enteritis in all age groups worldwide. Owing to the diversity of noroviruses, the development of vaccines and treatments is challenging, and an early and accurate diagnosis is crucial. Reference materials (RMs) developed previously for norovirus genotypes I (GI) and II (GII) were quantified using reverse transcription quantitative PCR. In this study, we developed norovirus GI and GII RMs as in vitro transcribed RNA forms. These RMs were then assigned reference values for the RNA copy number concentration. The concentrations of GI and GII RMs determined using in-house reverse transcription digital PCR assays were and copy/mL, respectively. The homogeneity and stability of the RMs were evaluated, and their compatibility with commercial diagnostic kits was validated. These RMs can be used for the development of detection assays, as calibrants for various molecular measurement techniques, and as test materials for internal and external quality assurance.
期刊介绍:
Launched in 1955, Virology is a broad and inclusive journal that welcomes submissions on all aspects of virology including plant, animal, microbial and human viruses. The journal publishes basic research as well as pre-clinical and clinical studies of vaccines, anti-viral drugs and their development, anti-viral therapies, and computational studies of virus infections. Any submission that is of broad interest to the community of virologists/vaccinologists and reporting scientifically accurate and valuable research will be considered for publication, including negative findings and multidisciplinary work.Virology is open to reviews, research manuscripts, short communication, registered reports as well as follow-up manuscripts.