缺血性卒中中铁下垂相关基因的鉴定和验证及其对外周免疫景观的影响。

IF 2.1 4区 医学 Q2 MEDICINE, GENERAL & INTERNAL International Journal of General Medicine Pub Date : 2024-12-19 eCollection Date: 2024-01-01 DOI:10.2147/IJGM.S485612
Yan Chen, Yanmei Zhu, Cong Huang, Youyang Qu, Yulan Zhu
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引用次数: 0

摘要

背景:本研究结合了与铁下垂相关的基因数据库和缺血性卒中样本的在线基因表达数据,以确定缺血性卒中病例中铁下垂相关基因(FRGs)。方法:采用基于这些基因的随机森林(Random Forest, RF)和支持向量机(Support Vector Machine, SVM)模型,将两个模型中重叠的基因识别为“Hub”基因。通过Hub基因的共识聚类分析,在缺血性脑卒中样本中发现了两个不同的FRGs聚类。对这些分子亚型与免疫微环境之间相关性的研究强调了基因表达水平与免疫细胞浸润之间的密切联系。FRG簇内基因表达和功能的显著差异凸显了Hub基因在免疫微环境中的关键作用。建立并验证了与铁下垂相关的基因诊断模型,以阐明所鉴定基因的意义。结果:Hub基因分类模型能有效区分缺血性脑卒中患者与正常样本,AUC为0.900,具有临床相关性。结论:本研究成功鉴定了缺血性脑卒中中铁沉相关基因,为未来综合治疗方案的制定提供了新的思路。
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Identification and Validation of Ferroptosis Related Genes in Ischemic Stroke and Its Effect on the Peripheral Immune Landscape.

Background: This research utilized a combination of gene databases associated with ferroptosis and online gene expression data from ischemic stroke samples to pinpoint ferroptosis-related genes (FRGs) in ischemic stroke cases.

Methods: By employing Random Forest (RF) and Support Vector Machine (SVM) models based on these genes, an overlap of genes from both models was identified as "Hub" genes. Through consensus clustering analysis using Hub genes, two distinct clusters of FRGs were revealed in ischemic stroke samples. Examination of the correlation between these molecular subtypes and the immune microenvironment highlighted a close link between gene expression levels and immune cell infiltration. Significantly different gene expression and functions within the FRG clusters underscored the pivotal role of Hub genes in the immune microenvironment. A gene diagnostic model related to ferroptosis was developed and validated to elucidate the significance of the identified genes.

Results: The results demonstrated that the Hub gene-based classification model effectively differentiated between ischemic stroke patients and normal samples, achieving an AUC of 0.900, signifying clinical relevance.

Conclusion: This study successfully identified ferroptosis-related genes in ischemic stroke, offering insights that could contribute to the formulation of future comprehensive treatment approaches.

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来源期刊
International Journal of General Medicine
International Journal of General Medicine Medicine-General Medicine
自引率
0.00%
发文量
1113
审稿时长
16 weeks
期刊介绍: The International Journal of General Medicine is an international, peer-reviewed, open access journal that focuses on general and internal medicine, pathogenesis, epidemiology, diagnosis, monitoring and treatment protocols. The journal is characterized by the rapid reporting of reviews, original research and clinical studies across all disease areas. A key focus of the journal is the elucidation of disease processes and management protocols resulting in improved outcomes for the patient. Patient perspectives such as satisfaction, quality of life, health literacy and communication and their role in developing new healthcare programs and optimizing clinical outcomes are major areas of interest for the journal. As of 1st April 2019, the International Journal of General Medicine will no longer consider meta-analyses for publication.
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