褐飞虱尿苷二磷酸(UDP)-糖基转移酶基因的全基因组鉴定和表达模式

IF 2.2 2区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Comparative Biochemistry and Physiology D-Genomics & Proteomics Pub Date : 2024-12-30 DOI:10.1016/j.cbd.2024.101403
Xiaohong Zheng , Hongfei Shang , Qifan Liu , Luao Tian , Yuzhen Yue , Shiqing Meng , Jiahui Chen , Linlin Su , Jiaxin Quan , Yi Zhang , Xiaoli Li , Kedong Xu , Xinxin Shangguan
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引用次数: 0

摘要

尿苷二磷酸-糖基转移酶(UGTs)通过将各种亲脂小分子与糖结合产生水溶性糖苷,实现糖基化,对植物次生代谢物的代谢和昆虫的解毒至关重要。本研究对亚洲稻害害虫褐飞虱(Nilaparvata lugens)的UGT基因家族进行了全基因组分析。根据与其他生物UGT同源物的相似性,在N. lugens中鉴定出20个推测的NlUGT基因。序列分析显示,氨基酸同源性平均为45.64%;然而,催化残基和糖结合残基以及UGT的特征基序是高度保守的。系统发育分析表明,20个NlUGTs可分为3个主要类群。基序数从5到10不等,其中基序1和基序4位于所有20个NlUGT蛋白的功能域。串联重复和片段重复分析鉴定出1对串联重复基因(UGT386K7和UGT386K8)和2对共线性基因(UGT362C6/UGT386J4和UGT386C2/UGT386G5),这些基因通过片段重复扩增。结合转录组和实时定量PCR数据显示,肠道、触角、被皮和卵巢是NlUGT基因表达富集的组织。六种nlugt主要存在于肠道,表明它们在解毒中的作用。本研究为飞虱UGTs的分子和遗传基础提供了有价值的信息,为后续飞虱UGTs的功能研究奠定了坚实的基础,也为确定潜在靶点,有效管理飞虱铺平了道路。
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Genome-wide identification and expression patterns of uridine diphosphate (UDP)-glycosyltransferase genes in the brown planthopper, Nilaparvata lugens
Uridine diphosphate-glycosyltransferases (UGTs) are responsible for glycosylation by combining various small lipophilic molecules with sugars to produce water-soluble glycosides, which are crucial for the metabolism of plant secondary metabolites and detoxification in insects. This study presents a genome-wide analysis of the UGT gene family in the brown planthopper, Nilaparvata lugens, a destructive insect pest of rice in Asia. Based on the similarity to UGT homologs from other organisms, 20 putative NlUGT genes were identified in N. lugens. Sequence analysis revealed an average amino acid identity of 45.64 %; however, catalytic and sugar-binding residues, along with UGT signature motifs, were highly conserved. Phylogenetic analysis showed that the 20 NlUGTs were clustered into three main groups. The motif numbers ranged from 5 to 10, with motifs 1 and 4 being found in the functional domains of all 20 NlUGT proteins. Tandem and segmental duplication analysis identified one tandem duplication pair (UGT386K7 and UGT386K8) and two pairs of collinearity genes (UGT362C6/UGT386J4 and UGT386C2/UGT386G5) that expanded through segmental duplication within the UGT gene family of N. lugens. Combining the transcriptome and real-time quantitative PCR data showed that gut, antennae, integument, and ovaries were the tissues enriched with NlUGT gene expression. Six NlUGTs were present mainly in the gut, suggesting their putative roles in detoxification. This research provides valuable information on the molecular and genetic basis of NlUGTs, establishing a solid foundation for subsequent functional investigations of UGTs in planthopper, as well as paving the way for identifying potential targets to manage N. lugens effectively.
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来源期刊
CiteScore
5.10
自引率
3.30%
发文量
69
审稿时长
33 days
期刊介绍: Comparative Biochemistry & Physiology (CBP) publishes papers in comparative, environmental and evolutionary physiology. Part D: Genomics and Proteomics (CBPD), focuses on “omics” approaches to physiology, including comparative and functional genomics, metagenomics, transcriptomics, proteomics, metabolomics, and lipidomics. Most studies employ “omics” and/or system biology to test specific hypotheses about molecular and biochemical mechanisms underlying physiological responses to the environment. We encourage papers that address fundamental questions in comparative physiology and biochemistry rather than studies with a focus that is purely technical, methodological or descriptive in nature.
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