法属波利尼西亚塔希提岛蝙蝠鱼(Platax orbicularis)中分离的platacbaculum platacbaculum sp. nov., vairaonense sp. 11 .和polynesiense sp. 11 .。

IF 2 3区 生物学 Q4 MICROBIOLOGY International journal of systematic and evolutionary microbiology Pub Date : 2025-01-01 DOI:10.1099/ijsem.0.006605
Pierre Lopez, Benjamin Fradet, Lucie Coffion, Jean-François Bernardet, Denis Saulnier, Eric Duchaud
{"title":"法属波利尼西亚塔希提岛蝙蝠鱼(Platax orbicularis)中分离的platacbaculum platacbaculum sp. nov., vairaonense sp. 11 .和polynesiense sp. 11 .。","authors":"Pierre Lopez, Benjamin Fradet, Lucie Coffion, Jean-François Bernardet, Denis Saulnier, Eric Duchaud","doi":"10.1099/ijsem.0.006605","DOIUrl":null,"url":null,"abstract":"<p><p>Ten novel Gram-negative, aerobic, non-sporulating, yellow-pigmented rod-shaped bacterial strains motile by gliding were isolated from marine organisms/environments in French Polynesia. Three of them designated as 190524A05c<sup>T</sup>, 190524A02b<sup>T</sup> and 190130A14a<sup>T</sup> were retrieved from orbicular batfish (<i>Platax orbicularis</i>) mucus. Online database comparisons using 16S rRNA amplicons resulted in over 95% similarity to the genus <i>Tenacibaculum</i>. Phylogenetic analyses based on 679 concatenated core protein sequences revealed that strains 190524A05c<sup>T</sup>, 190524A02b<sup>T</sup> and 190130A14a<sup>T</sup> showed the highest similarity to <i>Tenacibaculum skagerrakense</i> DSM 14836<sup>T</sup>, <i>Tenacibaculum xiamenense</i> LMG 27422<sup>T</sup> and <i>Tenacibaculum holothuriorum</i> S2-2<sup>T</sup>, respectively. Digital DNA-DNA hybridization and average nt identity values between strains 190524A05c<sup>T</sup>, 190524A02b<sup>T</sup> and 190130A14a<sup>T</sup> and other type strains were less than 76.25 and 24.1%, respectively. The DNA G+C content was 31.48, 30.66 and 31.98 mol% for strains 190524A05c<sup>T</sup>, 190524A02b<sup>T</sup> and 190130A14a<sup>T</sup>, respectively. Menaquinone-6 was detected as the major isoprenoid quinone in these three strains. The major polar lipids (phosphatidylethanolamine and aminophospholipid) were similar to the chemotaxonomic profile of other species of the genus <i>Tenacibaculum</i>. Strain 190524A05c<sup>T</sup> contained summed feature 3 (comprising C<sub>16:1</sub> ω7c and/or iso-C<sub>15:0</sub> 2-OH), iso-C<sub>15:1</sub> G, iso-C<sub>15:0</sub> and iso-C<sub>17:0</sub> 3-OH as the major cellular fatty acids. Strain 190524A02b<sup>T</sup> contained summed feature 3 (comprising C<sub>16:1</sub> ω7c and/or iso-C<sub>15:0</sub> 2-OH), iso-C<sub>15:0</sub>, iso-C<sub>15:1</sub> G and iso-C<sub>17:0</sub> 3-OH as the major cellular fatty acids. Strain 190130A14a<sup>T</sup> contained iso-C<sub>15:1</sub> G, summed feature 3 (comprising C<sub>16:1</sub> ω7c and/or iso-C<sub>15:0</sub> 2-OH), iso-C<sub>15:0</sub> and iso-C<sub>17:0</sub> 3-OH as the major cellular fatty acids. Based on the phenotypic and molecular features, these three strains represent novel species of the genus <i>Tenacibaculum</i> for which the names <i>Tenacibaculum platacis</i> sp. nov., with 190524A05c<sup>T</sup> (= CIP 112470<sup>T</sup> = DSM 118113<sup>T</sup>) as the type strain; <i>Tenacibaculum vairaonense</i> sp. nov., with 190524A02b<sup>T</sup> (= CIP 112469<sup>T</sup> = DSM 118112<sup>T</sup>) as the type strain; and <i>Tenacibaculum polynesiense</i> sp. nov., with 190130A14a<sup>T</sup> (= CIP 112468<sup>T</sup> = DSM 118111<sup>T</sup>) as the type strain, are proposed.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 1","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Tenacibaculum platacis</i> sp. nov., <i>Tenacibaculum vairaonense</i> sp. nov. and <i>Tenacibaculum polynesiense</i> sp. nov. isolated from batfish (<i>Platax orbicularis</i>) in Tahiti Island, French Polynesia.\",\"authors\":\"Pierre Lopez, Benjamin Fradet, Lucie Coffion, Jean-François Bernardet, Denis Saulnier, Eric Duchaud\",\"doi\":\"10.1099/ijsem.0.006605\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Ten novel Gram-negative, aerobic, non-sporulating, yellow-pigmented rod-shaped bacterial strains motile by gliding were isolated from marine organisms/environments in French Polynesia. Three of them designated as 190524A05c<sup>T</sup>, 190524A02b<sup>T</sup> and 190130A14a<sup>T</sup> were retrieved from orbicular batfish (<i>Platax orbicularis</i>) mucus. Online database comparisons using 16S rRNA amplicons resulted in over 95% similarity to the genus <i>Tenacibaculum</i>. Phylogenetic analyses based on 679 concatenated core protein sequences revealed that strains 190524A05c<sup>T</sup>, 190524A02b<sup>T</sup> and 190130A14a<sup>T</sup> showed the highest similarity to <i>Tenacibaculum skagerrakense</i> DSM 14836<sup>T</sup>, <i>Tenacibaculum xiamenense</i> LMG 27422<sup>T</sup> and <i>Tenacibaculum holothuriorum</i> S2-2<sup>T</sup>, respectively. Digital DNA-DNA hybridization and average nt identity values between strains 190524A05c<sup>T</sup>, 190524A02b<sup>T</sup> and 190130A14a<sup>T</sup> and other type strains were less than 76.25 and 24.1%, respectively. The DNA G+C content was 31.48, 30.66 and 31.98 mol% for strains 190524A05c<sup>T</sup>, 190524A02b<sup>T</sup> and 190130A14a<sup>T</sup>, respectively. Menaquinone-6 was detected as the major isoprenoid quinone in these three strains. The major polar lipids (phosphatidylethanolamine and aminophospholipid) were similar to the chemotaxonomic profile of other species of the genus <i>Tenacibaculum</i>. Strain 190524A05c<sup>T</sup> contained summed feature 3 (comprising C<sub>16:1</sub> ω7c and/or iso-C<sub>15:0</sub> 2-OH), iso-C<sub>15:1</sub> G, iso-C<sub>15:0</sub> and iso-C<sub>17:0</sub> 3-OH as the major cellular fatty acids. Strain 190524A02b<sup>T</sup> contained summed feature 3 (comprising C<sub>16:1</sub> ω7c and/or iso-C<sub>15:0</sub> 2-OH), iso-C<sub>15:0</sub>, iso-C<sub>15:1</sub> G and iso-C<sub>17:0</sub> 3-OH as the major cellular fatty acids. Strain 190130A14a<sup>T</sup> contained iso-C<sub>15:1</sub> G, summed feature 3 (comprising C<sub>16:1</sub> ω7c and/or iso-C<sub>15:0</sub> 2-OH), iso-C<sub>15:0</sub> and iso-C<sub>17:0</sub> 3-OH as the major cellular fatty acids. Based on the phenotypic and molecular features, these three strains represent novel species of the genus <i>Tenacibaculum</i> for which the names <i>Tenacibaculum platacis</i> sp. nov., with 190524A05c<sup>T</sup> (= CIP 112470<sup>T</sup> = DSM 118113<sup>T</sup>) as the type strain; <i>Tenacibaculum vairaonense</i> sp. nov., with 190524A02b<sup>T</sup> (= CIP 112469<sup>T</sup> = DSM 118112<sup>T</sup>) as the type strain; and <i>Tenacibaculum polynesiense</i> sp. nov., with 190130A14a<sup>T</sup> (= CIP 112468<sup>T</sup> = DSM 118111<sup>T</sup>) as the type strain, are proposed.</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 1\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006605\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006605","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

从法属波利尼西亚的海洋生物/环境中分离到10株新的革兰氏阴性、需氧、无孢子、黄色色素杆状细菌菌株。其中3个从圆形蝙蝠鱼(Platax orbicularis)粘液中提取,编号为190524A05cT、190524A02bT和190130A14aT。使用16S rRNA扩增子进行在线数据库比较,结果与Tenacibaculum属的相似性超过95%。基于679条核心蛋白序列的系统发育分析显示,菌株190524A05cT、190524A02bT和190130A14aT与skagerrakense Tenacibaculum DSM 14836T、厦门Tenacibaculum ximenense LMG 27422T和holothuriorum S2-2T的相似性最高。菌株190524A05cT、190524A02bT和190130A14aT与其他型菌株的数字DNA-DNA杂交和平均nt同源值分别小于76.25%和24.1%。菌株190524A05cT、190524A02bT和190130A14aT的DNA G+C含量分别为31.48、30.66和31.98 mol%。甲基萘醌-6是这3株菌株中主要的类异戊二烯醌。主要极性脂质(磷脂酰乙醇胺和氨基磷脂)与Tenacibaculum属其他物种的化学分类特征相似。菌株190524A05cT的主要细胞脂肪酸为总特征3(含C16:1 ω7c和/或iso-C15:0 2-OH)、iso-C15:1 G、iso-C15:0和iso-C17:0 3- oh。菌株190524A02bT的主要细胞脂肪酸为总特征3(含C16:1 ω7c和/或iso-C15:0 2-OH)、iso-C15:0、iso-C15:1 G和iso-C17:0 3- oh。菌株190130A14aT含有iso-C15:1 G,特征3(包括C16:1 ω7c和/或iso-C15:0 2-OH), iso-C15:0和iso-C17:0 3- oh为主要细胞脂肪酸。基于表型和分子特征,这3株菌株代表了Tenacibaculum属的新种,命名为Tenacibaculum platacis sp. nov.,类型菌株为190524A05cT (= CIP 112470T = DSM 118113T);vairaonense Tenacibaculum sp. nov.,以190524A02bT (= CIP 112469T = DSM 118112T)为型菌株;提出了以190130A14aT (= CIP 112468T = DSM 118111T)为类型菌株的波利尼西亚腱菌sp. nov.。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Tenacibaculum platacis sp. nov., Tenacibaculum vairaonense sp. nov. and Tenacibaculum polynesiense sp. nov. isolated from batfish (Platax orbicularis) in Tahiti Island, French Polynesia.

Ten novel Gram-negative, aerobic, non-sporulating, yellow-pigmented rod-shaped bacterial strains motile by gliding were isolated from marine organisms/environments in French Polynesia. Three of them designated as 190524A05cT, 190524A02bT and 190130A14aT were retrieved from orbicular batfish (Platax orbicularis) mucus. Online database comparisons using 16S rRNA amplicons resulted in over 95% similarity to the genus Tenacibaculum. Phylogenetic analyses based on 679 concatenated core protein sequences revealed that strains 190524A05cT, 190524A02bT and 190130A14aT showed the highest similarity to Tenacibaculum skagerrakense DSM 14836T, Tenacibaculum xiamenense LMG 27422T and Tenacibaculum holothuriorum S2-2T, respectively. Digital DNA-DNA hybridization and average nt identity values between strains 190524A05cT, 190524A02bT and 190130A14aT and other type strains were less than 76.25 and 24.1%, respectively. The DNA G+C content was 31.48, 30.66 and 31.98 mol% for strains 190524A05cT, 190524A02bT and 190130A14aT, respectively. Menaquinone-6 was detected as the major isoprenoid quinone in these three strains. The major polar lipids (phosphatidylethanolamine and aminophospholipid) were similar to the chemotaxonomic profile of other species of the genus Tenacibaculum. Strain 190524A05cT contained summed feature 3 (comprising C16:1 ω7c and/or iso-C15:0 2-OH), iso-C15:1 G, iso-C15:0 and iso-C17:0 3-OH as the major cellular fatty acids. Strain 190524A02bT contained summed feature 3 (comprising C16:1 ω7c and/or iso-C15:0 2-OH), iso-C15:0, iso-C15:1 G and iso-C17:0 3-OH as the major cellular fatty acids. Strain 190130A14aT contained iso-C15:1 G, summed feature 3 (comprising C16:1 ω7c and/or iso-C15:0 2-OH), iso-C15:0 and iso-C17:0 3-OH as the major cellular fatty acids. Based on the phenotypic and molecular features, these three strains represent novel species of the genus Tenacibaculum for which the names Tenacibaculum platacis sp. nov., with 190524A05cT (= CIP 112470T = DSM 118113T) as the type strain; Tenacibaculum vairaonense sp. nov., with 190524A02bT (= CIP 112469T = DSM 118112T) as the type strain; and Tenacibaculum polynesiense sp. nov., with 190130A14aT (= CIP 112468T = DSM 118111T) as the type strain, are proposed.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
期刊最新文献
A clinical study on the incidence of internal derangement of the temporomandibular joint following harvesting of temporalis fascia. Chionosphaera pinicorticola sp. nov., a novel basidiomycetous yeast species isolated from pine tree bark in Gyeongju, South Korea. Pseudonocardia spirodelae sp. nov., isolated from duckweed and formal proposal to reclassify Pseudonocardia antarctica as a later heterotypic synonym of Pseudonocardia alni and reclassify Pseudonocardia carboxydivorans as Pseudonocardia alni subsp. carboxydivorans. Vishniacozyma siamensis sp. nov., a new anamorphic tremellomycetous yeast species isolated from a mangrove forest in Thailand. Emendation of Recommendation 6(7), Rule 64 and Appendix 9 Section D of the International Code of Nomenclature of Prokaryotes to regulate the formation of prokaryote names from personal names.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1