通过rna测序和PI3K/Akt通路在暴露于稀土Nd2O3的小鼠肺中激活稀土尘肺患者血清外泌体的转录谱。

IF 2.9 3区 医学 Q2 TOXICOLOGY Toxicology letters Pub Date : 2025-01-03 DOI:10.1016/j.toxlet.2025.01.001
Yanrong Gao, Shurui Wang, Yuanqi He, Yupeng Ma, Suhua Wang
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引用次数: 0

摘要

稀土在世界范围内被广泛使用,稀土颗粒在工人中引起一种称为稀土尘肺病(REP)的呼吸道疾病,引起了相当大的关注。然而,以弥漫性肺纤维化为特征的REP机制尚不清楚。REP的进展涉及多种信号通路网络,包括多种细胞类型和细胞因子。外泌体作为细胞间通讯的重要媒介,正成为一个重要的研究课题。然而,外泌体lncrna、mirna和mrna在REP中的作用尚不清楚。在本研究中,我们对9例稀土尘肺患者和9名健康人的血清外泌体进行了高通量RNA测序,生成了长链非编码RNA(lncRNA)、microRNA (miRNA)和mRNA谱。我们的研究结果发现,稀土尘肺患者血清外泌体中共有94个lncRNAs、93miRNAs和29个mrna差异表达。随后,使用Ontology (GO)和京都基因与基因组百科全书(KEGG)分析差异表达的rna。外泌体基因丰富富集的GO通路为细胞质、蛋白结合、细胞骨架、核质转运等,外泌体基因的KEGG通路包括代谢和癌化通路、PI3K/Akt、wnt、mTOR、HIF-1、肌动蛋白细胞骨架和细胞周期等。RT-qPCR结果显示外泌体中lnc-KCNMB2-AS1、hsa-miR-186-5p、hsa-miR-100-5p、hsa-miR-381-5p、NCOA4和PLXDC1上调,lnc-TMEM151A、hsa-miR-758-5p和hsa-miR-6842-5p显著下调。此外,我们的研究发现,暴露于稀土Nd2O3的小鼠肺组织中,PI3K/Akt通路被激活,miR-100-5p的表达水平同步升高。在本研究中,PI3K/Akt通路对阐明REP的机制有重要帮助,这些发现可以为REP的机制提供新的见解,并开发新的治疗策略和生物标志物。
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Transcriptional profiling of exosomes derived from serum of patients with rare earth pneumoconiosis by RNA-sequencing and PI3K/Akt pathway is activated in lung of mice exposed to rare earth Nd2O3.

Rare earth is used extensively around the world, and rare earth particles cause a respiratory disease in workers termed rare earth pneumoconiosis(REP) that have attracted considerable attention. However, the mechanisms of REP, characterized by diffuse pulmonary fibrosis, are elusive. REP progression involves various signaling pathway networks comprising numerous cell types and cytokines. Acting as an important medium for communication between cells, exosomes are emerging as a major research topic. However, the role of exosomal lncRNAs, miRNAs and mRNAs in REP remains unclear. In the present study, we conducted high-throughput RNA sequencing to generate long non-coding RNA(lncRNA), microRNA (miRNA) and mRNA profiles from the serum exosomes of nine patients with rare earth pneumoconiosis and nine healthy people. Our results identified a total of 94 lncRNAs, 93miRNAs, and 29 mRNAs were differentially expressed in the serum exosomes of patients with rare earth pneumoconiosis. Subsequently, Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis were used to analyze the differentially expressed RNAs. The abundant enriched GO terms of exosomal genes are cytoplasm, protein binding, cytoskeleton, Nuclear cytoplasmic transport, and KEGG pathways of exosomal genes included metabolic and cancer pathway, PI3K/Akt, wnt, mTOR, HIF-1, actin cytoskeleton and cell cycle and so on. RT-qPCR results showed that lnc-KCNMB2-AS1, hsa-miR-186-5p, hsa-miR-100-5p, hsa-miR-381-5p, NCOA4 and PLXDC1 were up-regulated, and lnc-TMEM151A, hsa-miR-758-5p and hsa-miR-6842-5p were significantly down-regulated in exosomes. In addition, our study fuond that the PI3K/Akt pathway was activated, and the expression level of miR-100-5p was increased synchronously in lung tissue of mice exposed to rare earth Nd2O3. In this study, PI3K/Akt pathway is significant helpful in elucidating the mechanism of REP. These findings can provide new insights into the mechanism of REP and develop a novel treatment strategy and biomarker.

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来源期刊
Toxicology letters
Toxicology letters 医学-毒理学
CiteScore
7.10
自引率
2.90%
发文量
897
审稿时长
33 days
期刊介绍: An international journal for the rapid publication of novel reports on a range of aspects of toxicology, especially mechanisms of toxicity.
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