Jumanah Yousef Alshenaifi, Guglielmo Vetere, Giulia Maddalena, Mahmoud Yousef, Michael G White, John Paul Shen, Eduardo Vilar, Christine Parseghian, Arvind Dasari, Van Karlyle Morris, Ryan Huey, Michael J Overman, Robert Wolff, Kanwal P Raghav, Jason Willis, Kristin Alfaro, Andy Futreal, Y Nancy You, Scott Kopetz
{"title":"早发性结直肠癌的突变和共突变景观。","authors":"Jumanah Yousef Alshenaifi, Guglielmo Vetere, Giulia Maddalena, Mahmoud Yousef, Michael G White, John Paul Shen, Eduardo Vilar, Christine Parseghian, Arvind Dasari, Van Karlyle Morris, Ryan Huey, Michael J Overman, Robert Wolff, Kanwal P Raghav, Jason Willis, Kristin Alfaro, Andy Futreal, Y Nancy You, Scott Kopetz","doi":"10.1080/1354750X.2024.2447089","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>Colorectal cancer (CRC) incidence and mortality before 50 have been rising alarmingly in the recent decades.</p><p><strong>Methods: </strong>Using a cohort of 10,000 patients, this study investigates the clinical, mutational, and co-mutational features of CRC in early-onset (EOCRC, < 50 years) compared to late-onset (LOCRC, ≥ 50 years).</p><p><strong>Results: </strong>EOCRC was associated with a higher prevalence of Asian and Hispanic patients, rectal or left-sided tumors (72% vs. 59%), and advanced-stage disease. Molecular analyses revealed differences in mutation patterns, with EOCRC having higher frequencies of <i>TP53</i> (74% vs. 68%, <i>p</i> < 0.01) and <i>SMAD4</i> (17% vs. 14%, <i>p</i> = 0.015), while <i>BRAF</i> (5% vs. 11%, <i>p</i> < 0.001) and <i>NOTCH1</i> (2.7% vs. 4.1%, <i>p</i> = 0.01) mutations were more prevalent in LOCRC. Stratification by tumor site and MSI status highlighted significant location- and age-specific molecular differences, such as increased <i>KRAS</i> and <i>CTNNB1</i> mutations in right-sided EOCRC and higher <i>BRAF</i> prevalence in MSI-H LOCRC (47% vs. 6.7%, <i>p</i> < 0.001). Additionally, co-occurrence analysis revealed unique mutational networks in EOCRC MSS, including significant co-occurrences of <i>FBXW7</i> with <i>NOTCH3</i>, <i>RB1</i>, and <i>PIK3R1</i>.</p><p><strong>Conclusion: </strong>This study highlights the significance of age-specific molecular profiling, offering insights into the unique biology of EOCRC and potential clinical applications.</p>","PeriodicalId":8921,"journal":{"name":"Biomarkers","volume":" ","pages":"1-13"},"PeriodicalIF":2.0000,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Mutational and co-mutational landscape of early onset colorectal cancer.\",\"authors\":\"Jumanah Yousef Alshenaifi, Guglielmo Vetere, Giulia Maddalena, Mahmoud Yousef, Michael G White, John Paul Shen, Eduardo Vilar, Christine Parseghian, Arvind Dasari, Van Karlyle Morris, Ryan Huey, Michael J Overman, Robert Wolff, Kanwal P Raghav, Jason Willis, Kristin Alfaro, Andy Futreal, Y Nancy You, Scott Kopetz\",\"doi\":\"10.1080/1354750X.2024.2447089\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Introduction: </strong>Colorectal cancer (CRC) incidence and mortality before 50 have been rising alarmingly in the recent decades.</p><p><strong>Methods: </strong>Using a cohort of 10,000 patients, this study investigates the clinical, mutational, and co-mutational features of CRC in early-onset (EOCRC, < 50 years) compared to late-onset (LOCRC, ≥ 50 years).</p><p><strong>Results: </strong>EOCRC was associated with a higher prevalence of Asian and Hispanic patients, rectal or left-sided tumors (72% vs. 59%), and advanced-stage disease. Molecular analyses revealed differences in mutation patterns, with EOCRC having higher frequencies of <i>TP53</i> (74% vs. 68%, <i>p</i> < 0.01) and <i>SMAD4</i> (17% vs. 14%, <i>p</i> = 0.015), while <i>BRAF</i> (5% vs. 11%, <i>p</i> < 0.001) and <i>NOTCH1</i> (2.7% vs. 4.1%, <i>p</i> = 0.01) mutations were more prevalent in LOCRC. Stratification by tumor site and MSI status highlighted significant location- and age-specific molecular differences, such as increased <i>KRAS</i> and <i>CTNNB1</i> mutations in right-sided EOCRC and higher <i>BRAF</i> prevalence in MSI-H LOCRC (47% vs. 6.7%, <i>p</i> < 0.001). Additionally, co-occurrence analysis revealed unique mutational networks in EOCRC MSS, including significant co-occurrences of <i>FBXW7</i> with <i>NOTCH3</i>, <i>RB1</i>, and <i>PIK3R1</i>.</p><p><strong>Conclusion: </strong>This study highlights the significance of age-specific molecular profiling, offering insights into the unique biology of EOCRC and potential clinical applications.</p>\",\"PeriodicalId\":8921,\"journal\":{\"name\":\"Biomarkers\",\"volume\":\" \",\"pages\":\"1-13\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-01-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomarkers\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1080/1354750X.2024.2447089\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomarkers","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1080/1354750X.2024.2447089","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
引言:近几十年来,50岁以前的结直肠癌(CRC)发病率和死亡率一直在惊人地上升。方法:采用1万例患者的队列,本研究调查了早发性CRC (EOCRC, < 50岁)与晚发性CRC (LOCRC,≥50岁)的临床、突变和共突变特征。结果:EOCRC与亚洲和西班牙裔患者、直肠或左侧肿瘤(72%对59%)和晚期疾病的较高患病率相关。分子分析揭示了突变模式的差异,eoccrc中TP53(74%对68%,SMAD4(17%对14%,p = 0.015)的突变频率更高,而BRAF(5%对11%,NOTCH1(2.7%对4.1%,p = 0.01)突变在LOCRC中更为普遍。肿瘤部位和MSI状态的分层突出了显著的位置和年龄特异性分子差异,例如右侧EOCRC中KRAS和CTNNB1突变增加,MSI- h LOCRC中BRAF患病率更高(47% vs. 6.7%), FBXW7与NOTCH3、RB1和PIK3R1。结论:本研究强调了年龄特异性分子谱的重要性,为EOCRC独特的生物学和潜在的临床应用提供了见解。
Mutational and co-mutational landscape of early onset colorectal cancer.
Introduction: Colorectal cancer (CRC) incidence and mortality before 50 have been rising alarmingly in the recent decades.
Methods: Using a cohort of 10,000 patients, this study investigates the clinical, mutational, and co-mutational features of CRC in early-onset (EOCRC, < 50 years) compared to late-onset (LOCRC, ≥ 50 years).
Results: EOCRC was associated with a higher prevalence of Asian and Hispanic patients, rectal or left-sided tumors (72% vs. 59%), and advanced-stage disease. Molecular analyses revealed differences in mutation patterns, with EOCRC having higher frequencies of TP53 (74% vs. 68%, p < 0.01) and SMAD4 (17% vs. 14%, p = 0.015), while BRAF (5% vs. 11%, p < 0.001) and NOTCH1 (2.7% vs. 4.1%, p = 0.01) mutations were more prevalent in LOCRC. Stratification by tumor site and MSI status highlighted significant location- and age-specific molecular differences, such as increased KRAS and CTNNB1 mutations in right-sided EOCRC and higher BRAF prevalence in MSI-H LOCRC (47% vs. 6.7%, p < 0.001). Additionally, co-occurrence analysis revealed unique mutational networks in EOCRC MSS, including significant co-occurrences of FBXW7 with NOTCH3, RB1, and PIK3R1.
Conclusion: This study highlights the significance of age-specific molecular profiling, offering insights into the unique biology of EOCRC and potential clinical applications.
期刊介绍:
The journal Biomarkers brings together all aspects of the rapidly growing field of biomarker research, encompassing their various uses and applications in one essential source.
Biomarkers provides a vital forum for the exchange of ideas and concepts in all areas of biomarker research. High quality papers in four main areas are accepted and manuscripts describing novel biomarkers and their subsequent validation are especially encouraged:
• Biomarkers of disease
• Biomarkers of exposure
• Biomarkers of response
• Biomarkers of susceptibility
Manuscripts can describe biomarkers measured in humans or other animals in vivo or in vitro. Biomarkers will consider publishing negative data from studies of biomarkers of susceptibility in human populations.