追踪2023年意大利北部发生的1型登革热病例的起源、传播和分子进化

IF 3.3 3区 医学 Q2 MICROBIOLOGY Pathogens Pub Date : 2024-12-19 DOI:10.3390/pathogens13121124
Greta Romano, Guglielmo Ferrari, Antonino Maria Guglielmo Pitrolo, Francesca Rovida, Antonio Piralla, Fausto Baldanti
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引用次数: 0

摘要

登革热病毒(DENV)是一种蚊子传播的黄病毒,在许多热带和亚热带地区流行。在过去几十年里,登革热的全球发病率急剧上升,目前该病毒出现在100多个国家,使世界上近一半的人口面临风险。这一增长可归因于几个因素,包括城市化、气候变化和全球旅行,这些因素促进了病毒及其蚊子载体的传播。虽然登革热主要与热带地区有关,但由于白纹伊蚊的传播,温带地区的疫情正变得越来越普遍,白纹伊蚊是登革热病毒的一种能适应较冷气候的有效媒介。本研究调查了意大利北部伦巴第(Lombardy)地区2023年8月至9月本地暴发期间从13名患者中分离到的DENV 1型(DENV-1)毒株的分子动力学和地理演变。此外,从邻近地区收集了白纹伊蚊,以评估它们在疫情中的潜在作用。采用宏基因组方法从临床样本中恢复DENV-1一致序列。利用贝叶斯方法和来自其他国家的DENV-1序列综合数据集进行基因型分类和系统发育分析。意大利本土菌株与2020 - 2023年收集的南美菌株聚集在一起,特别是属于基因型V,亚型d的菌株,贝叶斯分析估计平均进化替代率为8.234 × 10-4 /年(95% HPD间隔:7.1448 × 10-4-9.3343 × 10-4),最近的共同祖先(tMRCA)时间为1972年(95% HPD间隔:1968-1976)。这些发现表明,该病毒可能是从南美流行地区传入该地区,然后在当地传播。这项研究为伦巴第DENV-1疫情的动态提供了有价值的见解,强调了基因组监测在监测病毒传播和进化中的重要性。这些发现强调,迫切需要加强分子和昆虫学监测,以便在存在白纹伊蚊等有能力的媒介的温带地区发现和应对新出现的登革热病例。公共卫生战略应优先考虑综合病媒管理、实时基因组监测和提高认识运动,以减轻未来暴发的风险。这些措施对于应对登革热病毒地域扩张所构成的日益严重的威胁至关重要。
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Tracing the Origin, Spread, and Molecular Evolution of Dengue Type 1 Cases That Occurred in Northern Italy in 2023.

The dengue virus (DENV) is a mosquito-borne flavivirus endemic to many tropical and subtropical regions. Over the past few decades, the global incidence of dengue has risen dramatically, with the virus now present in over 100 countries, putting nearly half of the world's population at risk. This increase is attributed to several factors, including urbanization, climate change, and global travel, which facilitate the spread of both the virus and its mosquito vectors. While dengue is primarily associated with tropical regions, outbreaks in temperate areas are becoming increasingly common due to the spread of Aedes albopictus, a competent vector for DENV that can adapt to cooler climates. This study investigates the molecular dynamics and geographic evolution of DENV type 1 (DENV-1) strains isolated from 13 patients during an autochthonous outbreak in Lombardy, Northern Italy, between August and September 2023. Additionally, Aedes albopictus mosquitoes were collected from a neighboring area to assess their potential role in the outbreak. A metagenomic approach was used to recover DENV-1 consensus sequences from clinical samples. Genotype classification and phylogenetic analyses were performed using Bayesian methods and a comprehensive dataset of DENV-1 sequences from other countries. The Italian autochthonous strains clustered with South American strains collected between 2020 and 2023, specifically those belonging to genotype V, subtype D. Bayesian analysis estimated a mean evolutionary substitution rate of 8.234 × 10-4 substitutions per site per year (95% HPD interval: 7.1448 × 10-4-9.3343 × 10-4), with the time to the most recent common ancestor (tMRCA) dating back to 1972 (95% HPD interval: 1968-1976). These findings suggest the likely introduction of the virus into the region from endemic areas in South America, followed by local transmission. This study offers valuable insights into the dynamics of the DENV-1 outbreak in Lombardy, underscoring the importance of genomic surveillance in monitoring viral spread and evolution. The findings emphasize the critical need for enhanced molecular and entomological surveillance to detect and respond to emerging autochthonous DENV cases in temperate regions where competent vectors, such as Aedes albopictus, are present. Public health strategies should prioritize integrated vector management, real-time genomic monitoring, and awareness campaigns to mitigate the risk of future outbreaks. These measures are essential to address the growing threat posed by the geographic expansion of the dengue virus.

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来源期刊
Pathogens
Pathogens Medicine-Immunology and Allergy
CiteScore
6.40
自引率
8.10%
发文量
1285
审稿时长
17.75 days
期刊介绍: Pathogens (ISSN 2076-0817) publishes reviews, regular research papers and short notes on all aspects of pathogens and pathogen-host interactions. There is no restriction on the length of the papers. Our aim is to encourage scientists to publish their experimental and theoretical research in as much detail as possible. Full experimental and/or methodical details must be provided for research articles.
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