{"title":"机器学习预测肺移植后原发性移植物功能障碍:一项可解释的模型研究。","authors":"Wei Xia, Weici Liu, Zhao He, Chenghu Song, Jiwei Liu, Ruo Chen, Jingyu Chen, Xiaokun Wang, Hongyang Xu, Wenjun Mao","doi":"10.1097/TP.0000000000005326","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Primary graft dysfunction (PGD) develops within 72 h after lung transplantation (Lung Tx) and greatly influences patients' prognosis. This study aimed to establish an accurate machine learning (ML) model for predicting grade 3 PGD (PGD3) after Lung Tx.</p><p><strong>Methods: </strong>This retrospective study incorporated 802 patients receiving Lung Tx between July 2018 and October 2023 (640 in the derivation cohort and 162 in the external validation cohort), and 640 patients were randomly assigned to training and internal validation cohorts in a 7:3 ratio. Independent risk factors for PGD3 were determined by integrating the univariate logistic regression and least absolute shrinkage and selection operator regression analyses. Subsequently, 9 ML models were used to construct prediction models for PGD3 based on selected variables. Their prediction performances were further evaluated. Besides, model stratification performance was assessed with 3 posttransplant metrics. Finally, the SHapley Additive exPlanations algorithm was used to understand the predictive importance of selected variables.</p><p><strong>Results: </strong>We identified 9 independent clinical risk factors as selected variables. Among 9 ML models, the random forest (RF) model displayed optimal performance (area under the curve [AUC] = 0.9415, sensitivity [Se] = 0.8972, specificity [Sp] = 0.8795 in the training cohort; AUC = 0.7975, Se = 0.7520, Sp = 0.7313 in the internal validation cohort; and AUC = 0.8214, Se = 0.8235, Sp = 0.6667 in the external validation cohort). Further assessments on calibration and clinical usefulness indicated the promising applicability of the RF model in PGD3 prediction. Meanwhile, the RF model also performed best in terms of risk stratification for postoperative support (extracorporeal membrane oxygenation time: P < 0.001, mechanical ventilation time: P = 0.006, intensive care unit time: P < 0.001).</p><p><strong>Conclusions: </strong>The RF model had the optimal performance in PGD3 prediction and postoperative risk stratification for patients after Lung Tx.</p>","PeriodicalId":23316,"journal":{"name":"Transplantation","volume":" ","pages":""},"PeriodicalIF":5.3000,"publicationDate":"2025-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Machine Learning for Predicting Primary Graft Dysfunction After Lung Transplantation: An Interpretable Model Study.\",\"authors\":\"Wei Xia, Weici Liu, Zhao He, Chenghu Song, Jiwei Liu, Ruo Chen, Jingyu Chen, Xiaokun Wang, Hongyang Xu, Wenjun Mao\",\"doi\":\"10.1097/TP.0000000000005326\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Primary graft dysfunction (PGD) develops within 72 h after lung transplantation (Lung Tx) and greatly influences patients' prognosis. This study aimed to establish an accurate machine learning (ML) model for predicting grade 3 PGD (PGD3) after Lung Tx.</p><p><strong>Methods: </strong>This retrospective study incorporated 802 patients receiving Lung Tx between July 2018 and October 2023 (640 in the derivation cohort and 162 in the external validation cohort), and 640 patients were randomly assigned to training and internal validation cohorts in a 7:3 ratio. Independent risk factors for PGD3 were determined by integrating the univariate logistic regression and least absolute shrinkage and selection operator regression analyses. Subsequently, 9 ML models were used to construct prediction models for PGD3 based on selected variables. Their prediction performances were further evaluated. Besides, model stratification performance was assessed with 3 posttransplant metrics. Finally, the SHapley Additive exPlanations algorithm was used to understand the predictive importance of selected variables.</p><p><strong>Results: </strong>We identified 9 independent clinical risk factors as selected variables. Among 9 ML models, the random forest (RF) model displayed optimal performance (area under the curve [AUC] = 0.9415, sensitivity [Se] = 0.8972, specificity [Sp] = 0.8795 in the training cohort; AUC = 0.7975, Se = 0.7520, Sp = 0.7313 in the internal validation cohort; and AUC = 0.8214, Se = 0.8235, Sp = 0.6667 in the external validation cohort). Further assessments on calibration and clinical usefulness indicated the promising applicability of the RF model in PGD3 prediction. Meanwhile, the RF model also performed best in terms of risk stratification for postoperative support (extracorporeal membrane oxygenation time: P < 0.001, mechanical ventilation time: P = 0.006, intensive care unit time: P < 0.001).</p><p><strong>Conclusions: </strong>The RF model had the optimal performance in PGD3 prediction and postoperative risk stratification for patients after Lung Tx.</p>\",\"PeriodicalId\":23316,\"journal\":{\"name\":\"Transplantation\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":5.3000,\"publicationDate\":\"2025-01-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Transplantation\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1097/TP.0000000000005326\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"IMMUNOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Transplantation","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1097/TP.0000000000005326","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"IMMUNOLOGY","Score":null,"Total":0}
Machine Learning for Predicting Primary Graft Dysfunction After Lung Transplantation: An Interpretable Model Study.
Background: Primary graft dysfunction (PGD) develops within 72 h after lung transplantation (Lung Tx) and greatly influences patients' prognosis. This study aimed to establish an accurate machine learning (ML) model for predicting grade 3 PGD (PGD3) after Lung Tx.
Methods: This retrospective study incorporated 802 patients receiving Lung Tx between July 2018 and October 2023 (640 in the derivation cohort and 162 in the external validation cohort), and 640 patients were randomly assigned to training and internal validation cohorts in a 7:3 ratio. Independent risk factors for PGD3 were determined by integrating the univariate logistic regression and least absolute shrinkage and selection operator regression analyses. Subsequently, 9 ML models were used to construct prediction models for PGD3 based on selected variables. Their prediction performances were further evaluated. Besides, model stratification performance was assessed with 3 posttransplant metrics. Finally, the SHapley Additive exPlanations algorithm was used to understand the predictive importance of selected variables.
Results: We identified 9 independent clinical risk factors as selected variables. Among 9 ML models, the random forest (RF) model displayed optimal performance (area under the curve [AUC] = 0.9415, sensitivity [Se] = 0.8972, specificity [Sp] = 0.8795 in the training cohort; AUC = 0.7975, Se = 0.7520, Sp = 0.7313 in the internal validation cohort; and AUC = 0.8214, Se = 0.8235, Sp = 0.6667 in the external validation cohort). Further assessments on calibration and clinical usefulness indicated the promising applicability of the RF model in PGD3 prediction. Meanwhile, the RF model also performed best in terms of risk stratification for postoperative support (extracorporeal membrane oxygenation time: P < 0.001, mechanical ventilation time: P = 0.006, intensive care unit time: P < 0.001).
Conclusions: The RF model had the optimal performance in PGD3 prediction and postoperative risk stratification for patients after Lung Tx.
期刊介绍:
The official journal of The Transplantation Society, and the International Liver Transplantation Society, Transplantation is published monthly and is the most cited and influential journal in the field, with more than 25,000 citations per year.
Transplantation has been the trusted source for extensive and timely coverage of the most important advances in transplantation for over 50 years. The Editors and Editorial Board are an international group of research and clinical leaders that includes many pioneers of the field, representing a diverse range of areas of expertise. This capable editorial team provides thoughtful and thorough peer review, and delivers rapid, careful and insightful editorial evaluation of all manuscripts submitted to the journal.
Transplantation is committed to rapid review and publication. The journal remains competitive with a time to first decision of fewer than 21 days. Transplantation was the first in the field to offer CME credit to its peer reviewers for reviews completed.
The journal publishes original research articles in original clinical science and original basic science. Short reports bring attention to research at the forefront of the field. Other areas covered include cell therapy and islet transplantation, immunobiology and genomics, and xenotransplantation.