免疫相关基因CD5是与乳腺癌肿瘤微环境相关的预后生物标志物。

IF 2.8 4区 医学 Q3 ENDOCRINOLOGY & METABOLISM Discover. Oncology Pub Date : 2025-01-13 DOI:10.1007/s12672-024-01616-7
Yi Zhao, Hengheng Zhang, Wenwen Wang, Guoshuang Shen, Miaozhou Wang, Zhen Liu, Jiuda Zhao, Jinming Li
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引用次数: 0

摘要

乳腺癌(BCa)的发生和发展是一个多因素、多步骤的复杂过程。肿瘤微环境(tumor microenvironment, TME)在这一过程中起着重要作用,但免疫成分和基质成分在TME中的作用有待进一步阐明。在本研究中,我们从the Cancer Genome Atlas (TCGA)数据库中获得了1086例患者的RNA-seq数据。我们使用CIBERSORT和ESTIMATE方法计算肿瘤浸润免疫细胞(tic)和免疫和基质成分的比例,并筛选差异表达基因(DEGs)。对deg进行总生存率的单因素Cox回归分析,并生成其蛋白质产物的蛋白质-蛋白质相互作用网络。最终获得中心基因CD5。高表达的CD5比低表达的存活时间更长。基因集富集分析表明,度调节high-CD5表达式组是主要富集在肿瘤的几种途径,而调节低表达组是丰富的蛋白质和脂质合成出口。TIC分析显示,CD5表达与CD8+ T细胞、活化记忆CD4+ T细胞、γ δ T细胞、M1巨噬细胞浸润呈正相关,与M2巨噬细胞浸润呈负相关。CD5可增加抗肿瘤免疫细胞浸润,减少M2巨噬细胞浸润。这些结果表明,CD5可能是一种潜在的预后生物标志物和治疗靶点,为BCa的治疗和预后评估提供了新的见解。
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The immune-related gene CD5 is a prognostic biomarker associated with the tumor microenvironment of breast cancer.

The occurrence and progression of breast cancer (BCa) are complex processes involving multiple factors and multiple steps. The tumor microenvironment (TME) plays an important role in this process, but the functions of immune components and stromal components in the TME require further elucidation. In this study, we obtained the RNA-seq data of 1086 patients from The Cancer Genome Atlas (TCGA) database. We calculated the proportions of tumor-infiltrating immune cells (TICs) and immune and stromal components using the CIBERSORT and ESTIMATE methods, and we screened differentially expressed genes (DEGs). Univariate Cox regression analysis of overall survival was performed on the DEGs, and a protein-protein interaction network of their protein products was generated. Finally, the hub gene CD5 was obtained. High CD5 expression was found to be associated with longer survival than low expression. Gene set enrichment analysis showed that DEGs upregulated in the high-CD5 expression group were mainly enriched in tumor- and immune-related pathways, while those upregulated in the low-expression group were enriched in protein export and lipid synthesis. TIC analysis showed that CD5 expression was positively correlated with the infiltration of CD8+ T cells, activated memory CD4+ T cells, gamma delta T cells, and M1 macrophages and negatively correlated with the infiltration of M2 macrophages. CD5 can increase anticancer immune cell infiltration and reduce M2 macrophage infiltration. These results suggest that CD5 is likely a potential prognostic biomarker and therapeutic target, providing novel insights into the treatment and prognostic assessment of BCa.

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来源期刊
Discover. Oncology
Discover. Oncology Medicine-Endocrinology, Diabetes and Metabolism
CiteScore
2.40
自引率
9.10%
发文量
122
审稿时长
5 weeks
期刊最新文献
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